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Statistical Methods in Medical Research 4ed

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to the likelihood, is a multivariate normal distribution, with mean b 0 and<br />

dispersion matrix D. The posterior distribution of b is multivariate normal,<br />

with dispersion M 1 and mean<br />

where<br />

16.3 The Bayesian l<strong>in</strong>ear model 539<br />

M 1 …s 2 X T y ‡ D 1 b 0†, …16:4†<br />

M ˆ s 2 X T X ‡ D 1 : …16:5†<br />

Notice that these formulae are multivariate analogues of the univariate version,<br />

where the posterior mean was derived as a sum weighted by precisions. The term<br />

s 2 X T X <strong>in</strong> (16.5), be<strong>in</strong>g the <strong>in</strong>verse of (11.51), can be thought of as the multivariate<br />

precision of the parameter, and the second term is the prior precision.<br />

The analogue of the sample mean is b, def<strong>in</strong>ed by (11.49), and from this it follows<br />

that X T y ˆ…X T X†b. Substitut<strong>in</strong>g this <strong>in</strong> (16.4) clearly demonstrates that the<br />

posterior mean has the form of a weighted sum, analogous to the univariate<br />

case. The situation where no prior <strong>in</strong>formation is available could be modelled by<br />

us<strong>in</strong>g an improper prior <strong>in</strong> which, formally, D 1 ˆ 0. Consequently, from (16.4)<br />

and (16.5), the posterior mean and variance reduce to the quantities (11.49) and<br />

(11.51), which are familiar from frequentist analysis. Of course, as b is now<br />

considered to be a random variable, there would be subtle differences <strong>in</strong> the<br />

way the uncerta<strong>in</strong>ty <strong>in</strong> the estimate of the regression coefficients would be<br />

expressed.<br />

This result, and for that matter the simpler univariate version adduced <strong>in</strong><br />

Chapter 6, is not, <strong>in</strong> itself, very useful because it supposes s 2 is known and has<br />

not been <strong>in</strong>cluded as a random quantity <strong>in</strong> the Bayesian analysis. How to <strong>in</strong>clude<br />

this parameter will now be discussed but, as will be seen, realistic approaches<br />

lead to complications.<br />

Conjugate and related analyses of normal samples with unknown<br />

variance<br />

The analysis <strong>in</strong> §6.2 is sufficiently realistic and elegant for it to be natural to<br />

attempt to extend the use of conjugacy arguments to accommodate unknown<br />

variance. When conjugate <strong>in</strong>formative priors are sought for this problem some<br />

difficulties arise, and these will be described below. However, some <strong>in</strong>sight <strong>in</strong>to<br />

the form of distribution that will be required can be ga<strong>in</strong>ed from the case where<br />

an improper un<strong>in</strong>formative prior is used. From §16.2, the un<strong>in</strong>formative prior<br />

for …m, s 2 † is p…m, s 2 †ˆ1=s 2 and from this it follows that the posterior is<br />

p…m, s 2 jy† /s n 2 exp<br />

1<br />

2s2 ‰…n 1†s 2 ‡ n…y m† 2 Š , …16:6†<br />

where y is the mean of a sample of size n which has variance s2 .

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