novel approaches to expression and detection of oestrus in dairy cows

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failed to record cow interaction, but these events were in small proportion; 16.7% in POC 2 and 14.1% in POC 3. Results differed when the automated script was applied to analyse the UWB data (see Table 5.3 and 5.4). The matching rate between UWB declared mounts and visually observed mounts was determined by the optimised script; 76.4% in POC 2 and 67.4% in POC 3. Accuracy of the optimised script was less good at detecting true mounts; 56.07% in POC 2 and 51.24% in POC 3. It was clear from the individual results presented in Tables 5.3 and 5.4 that the total number of mounts declared by script analysis exceeded the number of mounts that were observed visually. The incidence of UWB error and mounts not declared by the script were low when compared to the number of false mounts declared by the script, indicating that specificity of the script for individual mounting and standing events was poor. Approximately half of all actual mounts were detected. In an attempt to increase the accuracy of detection and specificity of the script ‘tight limits’ were used to analyse UWB data. Here the script accuracy decreased for POC 2, 54.8%, and increased slightly for POC 3, 52.2%. Matching rate however decreased dramatically to 55.7% for POC 2 and 41.9% for POC 3, which was as expected. However, without improvements to the script accuracy this approach did not benefit accurate oestrous detection. 114
Figure 5.2 Graph showing mounting between 2 cows with 8 numbered points showing the sequence in time as cow 533 (blue line) stood to be mounted by cow 543 (red line). The 3 dimensional positions are shown; horizontal x and y local coordinates and height z position in cm Figure 5.3 Graph complementing Figure 5.2 showing only the height changes in sequence of mounting as cow 533 (blue line) stood to be mounted by cow 543 (red line) in real-time, with time in the x axis and height to the nearest cm on y axis 115
Page 1 and 2:
NOVEL APPROACHES TO EXPRESSION AND
Page 3 and 4:
TABLE OF CONTENTS TABLE OF CONTENTS
Page 5 and 6:
2.2.3 Statistical Analyses ........
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5.3 RESULTS .......................
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Furthermore, automated software was
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LIST OF FIGURES Figure 1.1 Hormonal
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LIST OF TABLES Table 1.1 Trends in
Page 15 and 16:
LIST OF ABBREVIATIONS ˚ ˚C μM 2D
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CHAPTER 1 - Introduction & Literatu
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the past 50 years and duration of o
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Oestrus growing follicle (Staigmill
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ecomes the main inhibitor of FSH an
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calf at 40-50 days post partum; inv
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al., 2006). However, aged sperm hav
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can occur within 2-3 days, but if t
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educes the incidence of problem cow
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oestradiol, the LH surge and ovulat
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The secondary signs of oestrus can
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There are also changes in normal be
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engage in more natural behaviours i
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1983). Exact explanations and mecha
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2006) and disruption of LH secretio
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1.4.3.2 Milk Yield and Nutrition Di
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influence the ability of the ovary
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cyclicity can be delayed if dietary
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indication for the optimal time to
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calving), 3) pre-breeding heat date
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1.5.2 Physiological Changes Physiol
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1.5.2.3 Body and Milk Temperature T
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physical activity and stage of the
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caused by the general environment t
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may be gained. This is because data
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In summary the objective was to for
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diet, with concentrates at milking.
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oestrus was defined as 3 consecutiv
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The interaction between parity and
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individual oestrus was not signific
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Table 2.4 The effects of the intera
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(361 vs. 578 points, respectively,
Page 79 and 80: oestrous expression with increasing
Page 81 and 82: the blood (Sangsritavong et al., 20
Page 83 and 84: CHAPTER 3 - Single Nucleotide Polym
Page 85 and 86: population owing to previous select
Page 87 and 88: Table 3.1 Cont. Follicle Stimulatin
Page 89 and 90: 3.2.4 Sequencing of DNA in the Labo
Page 91 and 92: was achieved. PCR products were rem
Page 93 and 94: 3.4 DISCUSSION The objectives of th
Page 95 and 96: fertility and oestrous expression.
Page 97 and 98: CHAPTER 4 - Development of a Novel
Page 99 and 100: In summary UWB seems a good option
Page 101 and 102: Initial tests were carried out to i
Page 103 and 104: Therefore this demonstrates that X
Page 105 and 106: which is most important for achievi
Page 107 and 108: Figure 4.9 Horizontal - Vertical Di
Page 109 and 110: that UWB is matching the ‘truth
Page 111 and 112: mounting cow. For example height ch
Page 113 and 114: Backpack 1 st put on in AI stalls E
Page 115 and 116: Cows’ behaviour was assessed at 5
Page 117 and 118: or that the cows were in an area of
Page 119 and 120: plane, but mostly in achieving high
Page 121 and 122: Develop techniques for analysis of
Page 123 and 124: in elastic silicone moulded over a
Page 125 and 126: and time of mount, duration of moun
Page 127 and 128: observed matched with increases in
Page 129: 5.3 RESULTS Results demonstrate pos
Page 133 and 134: Table 5.1 Results from POC 2 showin
Page 135 and 136: Table 5.3 Efficiency and accuracy o
Page 137 and 138: oestrus and oestrus it is clear to
Page 139 and 140: P4 Concentration, ng/ml P4 Concentr
Page 147 and 148: Activity Activity Activity Activity
Page 153 and 154: 5.4 DISCUSSION The aim of this work
Page 155 and 156: averaged 70% which was lower than t
Page 157 and 158: when the cows lie down, especially
Page 159 and 160: the level of oestrous activity was
Page 161 and 162: technology larger herds must be mon
Page 163 and 164: monitoring could also monitor non-l
Page 165 and 166: antennae which could affect accurac
Page 167 and 168: predispose cows to illness e.g. met
Page 169 and 170: CHAPTER 6 - Overall Discussion & Co
Page 171 and 172: oestrus, h 2 =0.27 (Lovendahl et al
Page 173 and 174: The final section of this thesis de
Page 175 and 176: ate. By using UWB in a commercial s
Page 177 and 178: provides an insight the potential o
Page 179 and 180: BLOWEY, R. (2005) Factors associate
Page 181 and 182:
ovine gonadotrophin releasing hormo
Page 183 and 184:
GINTHER, O. J., KOT, K., KULICK, L.
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associated with embryonic survival
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ody condition at parturition on end
Page 189 and 190:
Signs in a 24-h Tie-Stalled Dairy H
Page 191 and 192:
SHERMAN, E. L., NKRUMAH, J. D., MUR
Page 193 and 194:
Influence of negative energy balanc
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