novel approaches to expression and detection of oestrus in dairy cows

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concentrate on the association between SNP and activity. The resulting model was: Y ijkl = µ + S i + P j + O k + C l + ε ijkl where Y ijkl is activity at oestrus, the fixed part of the model consists of µ the overall mean, S the effect of SNP, P the effect of parity, O the effect of oestrous season, C l the random effect of Cow, and ε ijkl the residual error. 3.3 RESULTS Results are reported for the association between SNPs at 41 loci on 18 genes and activity at oestrus. None of the genes studied (Table 3.1) were found to hold a true significant association with the activity increase at oestrus. 205 cows were blood sampled although due to the availability of genotyping at each locus and activity data at oestrus the number of cows in each analysis varied slightly and was often less. This highlights the seriously limited animal numbers used in this study. Two SNPs on 2 genes were found to be significantly associated with activity at oestrus (P
3.4 DISCUSSION The objectives of this study were to identify SNPs that are associated with increased oestrous expression. It is widely known that physical activity increases at the time of oestrus (Farris, 1954), with activity increasing from two- to four-fold (Kiddy, 1977). The genes investigated in this study were not found to have a true significant association with the activity increase at oestrus. SNPs on the ACTRIIB and STAT5A genes were found to be significant (P
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NOVEL APPROACHES TO EXPRESSION AND
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TABLE OF CONTENTS TABLE OF CONTENTS
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2.2.3 Statistical Analyses ........
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5.3 RESULTS .......................
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Furthermore, automated software was
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LIST OF FIGURES Figure 1.1 Hormonal
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LIST OF TABLES Table 1.1 Trends in
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LIST OF ABBREVIATIONS ˚ ˚C μM 2D
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CHAPTER 1 - Introduction & Literatu
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the past 50 years and duration of o
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Oestrus growing follicle (Staigmill
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ecomes the main inhibitor of FSH an
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calf at 40-50 days post partum; inv
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al., 2006). However, aged sperm hav
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can occur within 2-3 days, but if t
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educes the incidence of problem cow
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oestradiol, the LH surge and ovulat
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The secondary signs of oestrus can
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There are also changes in normal be
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engage in more natural behaviours i
Page 41 and 42: 1983). Exact explanations and mecha
Page 43 and 44: 2006) and disruption of LH secretio
Page 45 and 46: 1.4.3.2 Milk Yield and Nutrition Di
Page 47 and 48: influence the ability of the ovary
Page 49 and 50: cyclicity can be delayed if dietary
Page 51 and 52: indication for the optimal time to
Page 53 and 54: calving), 3) pre-breeding heat date
Page 55 and 56: 1.5.2 Physiological Changes Physiol
Page 57 and 58: 1.5.2.3 Body and Milk Temperature T
Page 59 and 60: physical activity and stage of the
Page 61 and 62: caused by the general environment t
Page 63 and 64: may be gained. This is because data
Page 65 and 66: In summary the objective was to for
Page 67 and 68: diet, with concentrates at milking.
Page 69 and 70: oestrus was defined as 3 consecutiv
Page 71 and 72: The interaction between parity and
Page 73 and 74: individual oestrus was not signific
Page 75 and 76: Table 2.4 The effects of the intera
Page 77 and 78: (361 vs. 578 points, respectively,
Page 79 and 80: oestrous expression with increasing
Page 81 and 82: the blood (Sangsritavong et al., 20
Page 83 and 84: CHAPTER 3 - Single Nucleotide Polym
Page 85 and 86: population owing to previous select
Page 87 and 88: Table 3.1 Cont. Follicle Stimulatin
Page 89 and 90: 3.2.4 Sequencing of DNA in the Labo
Page 91: was achieved. PCR products were rem
Page 95 and 96: fertility and oestrous expression.
Page 97 and 98: CHAPTER 4 - Development of a Novel
Page 99 and 100: In summary UWB seems a good option
Page 101 and 102: Initial tests were carried out to i
Page 103 and 104: Therefore this demonstrates that X
Page 105 and 106: which is most important for achievi
Page 107 and 108: Figure 4.9 Horizontal - Vertical Di
Page 109 and 110: that UWB is matching the ‘truth
Page 111 and 112: mounting cow. For example height ch
Page 113 and 114: Backpack 1 st put on in AI stalls E
Page 115 and 116: Cows’ behaviour was assessed at 5
Page 117 and 118: or that the cows were in an area of
Page 119 and 120: plane, but mostly in achieving high
Page 121 and 122: Develop techniques for analysis of
Page 123 and 124: in elastic silicone moulded over a
Page 125 and 126: and time of mount, duration of moun
Page 127 and 128: observed matched with increases in
Page 129 and 130: 5.3 RESULTS Results demonstrate pos
Page 131 and 132: Figure 5.2 Graph showing mounting b
Page 133 and 134: Table 5.1 Results from POC 2 showin
Page 135 and 136: Table 5.3 Efficiency and accuracy o
Page 137 and 138: oestrus and oestrus it is clear to
Page 139 and 140: P4 Concentration, ng/ml P4 Concentr
Page 141 and 142: P4 Concentration, ng/ml P4 Concentr
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P4 Concentration, ng/ml P4 Concentr
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P4 Concentration, ng/ml P4 Concentr
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Activity Activity Activity Activity
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5.4 DISCUSSION The aim of this work
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averaged 70% which was lower than t
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when the cows lie down, especially
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the level of oestrous activity was
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technology larger herds must be mon
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monitoring could also monitor non-l
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antennae which could affect accurac
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predispose cows to illness e.g. met
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CHAPTER 6 - Overall Discussion & Co
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oestrus, h 2 =0.27 (Lovendahl et al
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The final section of this thesis de
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ate. By using UWB in a commercial s
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provides an insight the potential o
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BLOWEY, R. (2005) Factors associate
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ovine gonadotrophin releasing hormo
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GINTHER, O. J., KOT, K., KULICK, L.
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associated with embryonic survival
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ody condition at parturition on end
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Signs in a 24-h Tie-Stalled Dairy H
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SHERMAN, E. L., NKRUMAH, J. D., MUR
Page 193 and 194:
Influence of negative energy balanc
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