18.02.2019 Views

Gene Variant Report issued

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Lifestyle Genomics Research Centre Ltd.<br />

Plymouth Science Park, 1 Davy Road, Derriford, Plymouth, PL6 8BX , UNITED KINGDOM contact us<br />

SAMPLE PROCESSED BY:<br />

METHOD:<br />

DATA CHECKED FOR ACCURACY BY:<br />

Genome Centre at BARTS and The London School of Medicine and Dentistry<br />

Fluidigm TaqMan probe-based SNP genotyping / Illumina MiSeq, Next <strong>Gene</strong>ration<br />

sequencing<br />

Genome Centre at BARTS and The London School of Medicine and Dentistry<br />

NOTES:<br />

genotype has no risk alleles<br />

genotype has one risk allele<br />

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genotype has two risk allels<br />

either allele can be a risk or be<br />

beneficial<br />

Ctr+F to activate Search Engine: Look up genes, rsids, pathways / traits<br />

SNP RSID INTERPRET ☞ PARENT GENE & VARIANT ⚛ CATEGORY ☤ / PATHWAY ⥹ RISK ALLELES !! cp00035774<br />

rs234706 Homocysteine to Cystathionine CBS C699T Methylation AA GA<br />

rs1677693 FOLR2 to DHF, DHF to THF DHFR Methylation TT GT<br />

rs705415 rs705415 DMGDH Methylation TT CT<br />

rs2071010<br />

Binds folates to transport the inside<br />

cells.<br />

FOLR1 Methylation AA GG<br />

rs651933<br />

Binds folates to transport the inside<br />

cells.<br />

FOLR2 Methylation GG AA<br />

rs17851582<br />

Arginine to Guanidoacetate to<br />

Creatine (SAMe)<br />

GAMT Methylation AA GG<br />

rs55776826<br />

Arginine to Guanidoacetate to<br />

Creatine (SAMe)<br />

GAMT Methylation TT CC<br />

rs3780127 rs3780127 GGH Methylation AA GG<br />

rs3780126 GGH Methylation TT GA<br />

rs72558181 rs72558181 MAT1A Methylation TT CC<br />

rs2236225<br />

THF to Purines (ATP & GTP) & 10-<br />

Formyl-THF to 5,10 Methenyl THF to<br />

MTHFD1 Methylation AA GA<br />

5,10 Methylene THF<br />

rs1801131 rs1801131 MTHFR A1298C Methylation GG TT

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