Analyse avec le logiciel imagej d'un lot d'images en microscopie par ...

C:\Documents and Settings\montarou\Bureau\correction\chandez\PLU_RGB_Avg_v3_.java jeudi 22 juillet 2010 16:22
if (!file.exists()) {
pw.println("File " + file + " does not exist.");
return null;
}
Opener opener = new Opener();
ImagePlus img = opener.openImage(file.getParent(), file.getName());
if (img.getWidth()!=width && img.getHeight()!=height) {
IJ.showMessage("Dimensions incompatibles", "Hauteurs et/ou largeurs PLU/Image
differentes!");
return null;
}
in2p3-00530281, version 1 - 28 Oct 2010
}
/*
*/
FileInfo fi = img.getFileInfo();
if (fi==null)
return null;
pw.println();
pw.println("-------IJTiffTest results-------");
pw.println("Details for result image "+dirname+filename);
pw.println(fi);
pw.println("info=" + fi.info);
pw.println("description=" + fi.description);
IJ.showStatus("");
return img;
to use Logger in any java application
// Set the human readable handler
public void openLogger(String directory) {
// typically use one logger per class
logger = Logger.getLogger(PLU_RGB_Avg_v3_.class.getName());
fh = null;
try {
// Get the current class
String classNameMethodName = this.getClass().getName(); // Full class name
// This block configure the logger with handler and formatter
//fh = new FileHandler("C:\\Imaging\\ImageJ\\plugins\\Innotep_\\"+classNameMethodName+".log", true);
fh = new FileHandler(directory+classNameMethodName+".log", true);
logger.addHandler(fh);
logger.setLevel(Level.ALL);
SimpleFormatter formatter = new SimpleFormatter();
//fh.setFormatter(new XMLFormatter());
fh.setFormatter(formatter);
// the following statement is used to log any messages
logger.log(Level.WARNING,"My log");
} catch (SecurityException e) {
e.printStackTrace();
} catch (IOException e) {
e.printStackTrace();
}
logger.severe("my severe message");
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