full report - UCT - Research Report 2011

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274 use in a wide range of immunological studies applicable to communicable and non-communicable diseases. These have been used to make important advances in diseases, such as Tuberculosis, Bilharzia, African Trypanosomiasis, Candidiasis and cutaneous Leishmaniasis and have contributed significantly to identifying fundamental cellular and molecular immunological mechanisms. Together with international and national collaborations, these animal tools contribute to many advances in Immunology and other fields. Basic research in the Allergy Section has focused on the role of IL-4 and IL-13 in allergy as well as the application of novel assays to identify sensitivity profiles. There are very close ties with the South African component of the International Centre for Genetic Engineering and Biotechnology, providing a very strong genomics thrust to the Division. Translational Research: There is also a strong clinical immunology emphasis in the Division, specifically in HIV and TB immunology where studies are underway to understand adaptive and innate immune responses during acute HIV infection and in infants exposed to HIV in utero and upon receiving different childhood vaccinations. Funding has been garnered that will allow breast-feeding practices of mothers to be linked with the immune activation status of the newborn infant and mechanisms that may potentially mitigate EPI responses. Understanding the link between HIV-induced inflammation and autoimmunity, where peripheral tolerance has been broken, is a new direction within the Division. Service: The combined functions of the Laboratory for Tissue Immunology (LTI) and the Clinical Immunology and Allergy Laboratory are responsible for providing NHLS activities. The LTI is responsible for HLA class I and class II typing for solid organ and bone marrow/stem cell matching. It is the only HLA lab in South Africa to have European Federation of Immunogenetics (EFI) accreditation. The Laboratory also performs cross-matching and pre-formed antibody testing for renal transplantation. The Clinical Immunology and Allergy Laboratory performs routine diagnostic testing for autoantibodies and different allergies. Teaching: The Division has an active teaching component in the medical undergraduate syllabus and provides up to date lectures on the basics of the immune system and integrates immunology concepts and principals with the case studies and problem based learning approach by the Faculty. More advanced courses are offered at the postgraduate level through the Honours in Infectious Disease and Immunology programme and the relatively newly formed Immunology Course for postgraduate students. Moreover, members of the Division are involved in the International Research Training Group (IRTG), a student exchange program between the University of Wuerzburg, Germany, Stellenbosch and UCT. The Division also holds workshop on infectious disease and immunology and specifically train students from other countries in Africa on advanced immunology related techniques and cuttingedge science. International Links: There are very strong links between staff in the Division with international collaborators on all continents in both basic and applied research. Divisional statistics permanent & long term contract staff (uct/ nhls/pgWc) Professors 4 Associate Professors 2 lecturers 6 research Staff 9 technical Staff 17 technical Support Staff 5 Administrative Staff 2 total 45 students Postdoctoral 12 Doctoral 15 master’s 3 honours 5 total 35 reSeArCh FielDS & StAFF academic staff ProFeSSor Clive grAy PhD Wernher Beit Chair and HOD Immunology; Full member of the IIDMM; B rating by NRF; Research Profile: Immunology of HIV infection and specific T cell responses during acute infection. ProFeSSor FrANk brombACher, PhD Professor of Immunology; UCT Fellow; SARChI Chair, Director of an MRC Unit; ICGEB Coordinator & Group leader, Member of IIDMM; A1-rating by NRF; Research profile: Immunology of infectious diseases, including Tuberculosis, African Trypanosomiasis, Leishmaniasis, Bilharzia and other Helminth infections. A/ProFeSSor muAZZAm JACobS, PhD NHLS Medical Scientist and UCT Senior Lecturer; Full member of the IIDMM. Research profile: Understanding host pathogen interaction and associated immune mechanisms that bring about protection against tuberculosis infection. Dr bArbArA NurSe, PhD NHLS Medical Scientist. Research profile: T cells in allergic diseases: Cytokine responses to allergen and mTB protein in atopic asthmatic children; Immune changes underlying UCT ReseARCh RepORT '11
successful immunotherapy; Investigation of the role of T cells in drug-responsive and extensively drug-resistant (XDR) tuberculosis. Dr williAm horSNell PhD UCT Lecturer in Immunology. Associate member of IIDMM. C2 NRF rating. Convener of IDI Honours postgraduate degree. Research profile: Immunity to helminth infections. Maternal and co-infection immunity. Acetylchoine signalling in the immune system. Dr heAther JASPAN mD, PhD, FAAP Senior Lecturer. Associate member of the IIDMM. Research Profile: Investigating immune activation, T cell immunity and susceptibility to HIV in infants. pass staff liZette FiCk - Technologist FArieD AbbASS - P3 Assistant george JACobS - Laboratory Assistant SArAh lotteriNg - Laboratory Assistant ChADriCk JohN - Laboratory Assistant rubeN mQAmbeli - Laboratory Assistant weNDy DryDiNg - Technical Assistant DhurAiyAh AbDullAtieF - Administrator gloriA mCkiNNoN - Administrator nhls staff Derek tAlJAArD - lAborAtory mANAger, tiSSue immuNology ShireeN mAArt - Senior Technologist beghum PillAy - Senior Technologist JAmeS bANkS -Senior Technologist gitA ShibA - Technologist JoNAS kolikile -Technologist terry SChlAPhoFF -Senior Technologist (South African Bone Marrow Registry) veroNiCA borrill - Senior Technologist (South African Bone Marrow Registry) Dr mArCiA wAtkiNS - Laboratory Manager, Clinical Immunology and Allergy erNA kotZe - Technologist honorary staff members ProF. berNhArD ryFFel Director: Institute Transgenose- CNRS; Research profile: i) Immunology of Infectious diseases: Tuberculosis; HIV/ Aids; Prion protein infection; ii) Allergy; iii) Vaccines A/ProFeSSor gorDoN browN, PhD Honorary Professor of Immunology; Adjunct Member of IIDMM; 6th Century chair of Immunology, University of Aberdeen; Research Profile: Innate immunity to Candidiasis FACULTY OF heALTh sCienCes and Tuberculosis; C-type lectin recptors in infection and homeostasis; Immunomodulatory effects of Beta-glucans. A/ProF ANDreAS loPAtA Group Leader: Molecular Immunology; Academic Adviser Biochemistry and Molecular Biology James Cook University, Australia; Seafood allergies and Occupational Allergies in workers in seafood industry research contract staff bArthA FeNemore – Technologist roNAlD Dreyer – FACS Technician rAyAANA FreDeriCkS - Research Assistant FADwAh booley - Research Assistant Dr ANitA SChwegmANN - Research Scientist (left in 2011) Dr NASiemA Allie - Junior Lecturer postdoctoral fellows Dr reto guler investigate using 4 different pathogens, i.e. Listeria monocytogenes, mycobacteria tuberculosis, mycobacteria bovis BCG, and Leishmania major Dr NAtAlie NieuweNhuiZeN Characterization of Anisakis Allergens Dr mArk bArkhuiZeN: The Role of Interleukin-12 in Pathogenic Trypanasome Infections Dr roANNe keetoN TB Immunology Dr FrANk kirSteiN Investigation of immune responses in different mouse models of allergic asthma” Dr melANie bretoN-revAZ IL-4 Receptor-dependent Lymphocyte responses to Leishmania Dr NAi-JeN hSu Understanding TNF-TNFR signaling and its impact on microglia-neuronal cell interaction Dr tiroyAoNe brombACher Neuro-immunological effects of Nippostrongylus brasiliensis on cognitive function. Dr roANNe keetoN The role of TNFR signalling in pulmonary tuberculosis Dr SASkiA SCmiDt (leFt iN 2011) Dr SuZANA SAvvi (leFt iN 2011) 275
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20 11 University of Cape Town Resea
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2 Our Mission Statement UCT aspires
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4 UCT RESEARCH REPORT '11
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34 Dr David Braun: Researching the
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162 Research without borders UCT Re
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178 lewis, a.e. and naTHOO, J.a. Me
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182 governance. In O. Bodin and C.
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184 exhibitions Todeschini, F. 2011
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186 pOsTdOcTOral FellOws dr Mayeli
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188 Govender, I., Mangesana, N., Ma
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192 Bbosa, L.S., Govender, I., Main
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216 Doctoral graDuations P.H. Bamu
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222 articles peer-reviewed Journals
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326 Gabriels, G.A., Lambert, M.I.,
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328 antiretroviral therapy in South
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332 Opie, L.H. 2011. Glycaemia and
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334 Cornick, R., Faris, G.F. and Dr
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336 of Serum C-Reactive Protein as
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338 Dr ANNe horAk High risk obstetr
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342 child and adolescent psychiatry
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344 of adverse effect in fetal alco
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346 Stein, D.J., Bandelow, B., Meri
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350 pesticide risk management is st
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354 system; human rights issues in
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356 Schuur Hospital, Cape Town, dur
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358 Harris, B., Goudge, J., Ataguba
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360 Mann, g., Thomson, R., Jin, C.,
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362 and Zwarenstein, M. 2011. From
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364 assistant managers (medical phy
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366 contract research staff part-ti
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368 de Boer, R.H., Arrieta, O., Yan
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370 segment surgery, corneal diseas
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372 DiviSioN oF emergeNCy meDiCiNe
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374 students Doctoral 1 master’s
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376 CoNtACt DetAilS Postal Address:
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378 permanent and long term contrac
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380 auxilliary artery injuries. Sou
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382 Van Zyl, L. 2011. Severe bilate
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384 host of the world-renowned Jame
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386 m. mutowo (graDuatE School of B
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388 aSSociatE profESSor JEnnifEr ro
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394 Steyn and E.M. Villeneuva (eds)
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398 profESSor anthony Black Develop
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400 mr DaviD (chEn-wEi) tSEng Labou
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402 articles in peer-reviewed Journ
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406 school statistics professors 4
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408 Raubenheimer, H. 2011. Constrai
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410 South African women’s magazin
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412 Africa Can, pp. 371-399. Washin
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414 Faculty of Humanities Dean’s
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416 South African Art in Context Vo
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418 n. mAmmon (EnviRonmEntAl And gE
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420 REsEARch outPut edited books Ok
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422 AssociAtE PRofEssoR lEslEy mARx
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424 Ndlovu, M.W. 2011. The meaning
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426 chapters in books Alexander, J.
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428 Collection, Neu-Ulm/Burlafingen
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430 REsEARch outPut articles in pee
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432 Dance International: Produced a
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434 Mahali, A. 2011. “Piecing tog
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436 PRofEssoR johAn mullER Curricul
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438 peer-reviewed published confere
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440 EmERitus PRofEssoR gEoffREy hug
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442 Schalkwyk, D.J. 2011. The impos
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444 Pissarra, M., Goniwe, T. and Ma
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446 and Cinema in Francophone West
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448 Hambidge, J.H. 2011. Alle grapp
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450 mR. williAm hAuBRich Brass, par
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452 Hofmeyr, H.P. 2011. Il poeta e
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454 Grace, J. 2011. “Concert in t
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456 Liebl, L.B. 2011. Carmina Buran
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458 Van Schalkwyk, A. 2011. Liszt 2
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460 Wanderer, J.R. 2011. On Vice an
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462 Cameron, R.G. and Milne, C. 201
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464 Carr, S.C., Bandawe, C.R., Mart
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466 Department of religious stuDies
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468 Mobilising Religious Health Ass
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470 PRof cARolyn hAmilton National
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472 Department of social DeVelopmen
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474 pedagogics in higher education;
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476 Sitas, A. 2011. The moving blac
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478 Steinberg, J. 2011. A bag of so
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480 AIDS policy, AIDS denialism; AI
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482 Faculty of Science Dean’s rep
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484 in Professor Kevin Naidoo, Prof
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486 m.f. munyololo (Chemistry) New
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488 britton, d.t. And hÄrtinG, m.
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490 emeritus professors professor n
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492 Department of astronomy (Includ
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494 reseArCh output articles in pee
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496 De Blok, W.J.G. 2011. The MeerK
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498 students postdoctoral 4 doctora
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500 February, E.C., Allsopp, N., Sh
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502 Schutz, A., Bond, W.J. and Cram
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504 AssoCiAte professor dAvid W. GA
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506 Cabrera, D.G., Douelle, F., Fen
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508 and Heck cross-coupling reactio
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510 secure data storage on the web.
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512 Kapuire, G. and Blake, E.H. 201
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516 dr Chris lennArd Atmospheric sc
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518 developing world fisheries. Law
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520 reseArCh output edited books Fa
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522 Rowe, C. and Backeberg, N. 2011
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524 dr mArGAret ArChibAld Lecturer;
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526 articles in peer-reviewed Journ
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528 Ellis, G.F.R. 2011. Shear free
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530 Uzan, J., Ellis, G.F.R. and Lar
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532 students post-doctoral 10 docto
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534 Galvao, B., Meggersee, R.L. and
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536 feather disease virus isolates.
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538 dr s. sWArt Southern ocean Biog
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540 Shillington, F.A. 2011. Johann
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542 professor f.e. lubben Physics E
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544 Govender, I., Mangesana, N., Ma
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546 professor GrAhAm bArr Econometr
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548 Newling, J., Varughese, M., Bas
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550 depArtmentAl stAtistiCs permane
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552 Honorary professors professor d
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554 ContACt detAils Tel: +27 21 650
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556 Blattodea), with placement of a
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558 Marchante, H., Freitas, H. and
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560 a description of a new species
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562 Zetlmeisl, C., Hermann, J., Pet
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564 A new generation of university
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566 aCaDemIC DeVeLopment proGramme
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568 Dr howArD PeArCe Senior Lecture
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570 into entrepreneurial ventures:
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572 Centre For InFormatIon LIteraCY
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574 ASSoCIATe ProfeSSor SueLLen ShA
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