full report - UCT - Research Report 2011

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486 m.f. munyololo (Chemistry) New synthetic routes to functionalised 2-C-alkylglucosides, precursors of potential inhibitors of mycothiol biosynthesis in the Mycobacteria. supervised by Associate Professor D.W. Gammon G. oAtley (ZooloGy) Taxonomy, phylogeny and eco-biogeography of Southern African white-eyes (Zosterops spp.) Aves: Order Passeriformes Family: Zosteropidae. supervised by Associate Professor J.H. Hoffmann A.m.o. ribeiro (ZooloGy) Ecological and evolutionary processes in two Southern African endemic birds. supervised by Professor P.A.R. Hockey m. rouAult (oCeAnoGrAphy) Agulhas Current variability determined from space: A multi-sensor approach. supervised by Professor F. Shillington h. sAmsodien (Chemistry) Supramolecular derivatives of selected bioactive compounds: A physicochemical study. supervised by Professor M. Caira and Professor S. Bourne d. shuuluKA (botAny) Ecophysiological studies of three South African Ulva species from integrated seaweed/abalone aquaculture and natural populations. supervised by Professor J. Bolton and Professor R. Anderson r. sithAldeen (ArChAeoloGy) Phylogeny and phylogeography of the Chacma Baboon (Papio ursinus): The role of landscape in shaping contemporary genetic structure in the Southern African baboon. supervised by Associate Professor R. Ackermann and Dr J. Bishop J.A. slinGsby (botAny) Ecological differentiation and the evolution and maintenance of Fynbos diversity. supervised by Dr T. Verboom and Professor M. Cramer m. spArK (Astronomy) Exploring the application of new telescope technologies in the testing of dwarf novae accretion models. supervised by Associate Professor P.A. Woudt A. teKolA (Astronomy) On evolution of star forming galaxies: the metallicity of dwarfs and the effect of environment on local luminous IR galaxies. supervised by Associate Professor P.A. Woudt, Dr P. Vaisanen and Dr A. Kniazev r.e. thArme (ZooloGy) Ecologically relevant low flows for riverine benthic macroinvertebrates: characterisation and application. supervised by Associate Professor J. Day and Professor J.M. King f. tummon (environmentAl And GeoGrAphiCAl sCienCe) Direct and semi-direct aerosol effects on the Southern African regional climate during the austral winter season. supervised by Dr M. Tadross, Professor B. Hewitson and Professor F. Solomon i.W. tunbridGe (Computer sCienCe) Graphics Processing Unit Accelerated Coarse-Grained Protein-protein docking. supervised by Dr M. Kuttel and Dr J. Gain r. tuyirAGiZe (stAtistiCAl sCienCes) Multi-objective optimisation techniques in electricity generation planning. supervised by Emeritus Professor T. Stewart K.l. vAn nieKerK (ArChAeoloGy) Marine fish exploitation during the Middle and Later Stone Age of South Africa. supervised by Professor J. Sealy r.J.t. verWeiJ (botAny) Niche differentiation in savannas: exploring competitionbased hypotheses for inter-life form co-existence. supervised by Dr E. February and Professor W. Bond l.J. WAller (ZooloGy) The African Penguin (Spheniscus demersus): Conservation and management issues. supervised by Professor L. Underhill J.d. WoodWArd (moleCulAr And Cell bioloGy) The relationship between structure and specificity in the plant nitrilases. supervised by Associate Professor T. Sewell UCT ReseaRCh RepoRT '11
patents FILED APPLICATIONS britton, d.t. And hÄrtinG, m. Assembling and packaging a discrete electronic component. PCT Patent Application PCT PCT/ IB2011/053999. britton, d.t. And hÄrtinG, m. Printed temperature sensor. PCT Patent Application PCT PCT/IB2011/054001. britton, d.t. And hÄrtinG, m. Producing stable oxygen terminated semi conducting nanoparticles. National Phase Patent Application Russia 2011 137 638. britton, d.t., hÄrtinG, m. And odo, A.e. Inkjet printing of nanoparticulate functional inks. National Phase Patent Application Russia RUxIB2009/052317. britton, d.t. And sCribA, m.r. Method of producing nanoparticles. Provisional Patent Application South Africa 2011/05035. CAirA, m.r., de villiers, m.m., liebenberG, W. And stienGer, n. An injectable formulation. PCT Patent Application PCT PCT/IB2011/052386. ChiririWA, h., hendriCKs, d.t. And moss, J.r. Organometallic compounds. PCT Patent Application PCT PCT/IB2011/001441. de Wit, m.J. And Gilder, s.A. The genesis of a diamond. National Phase Patent Application South Africa 2011/09252. eGAn, t.J., hunter, r. And Zishiri, v.K. Quinoline antimalarial containing a chloroquine resistance reversing dibemethin group. National Phase Patent Application South Africa ZAxPCTIB09/053578. eGAn, t.J, hunter, r. And Zishiri, v.K. Quinoline compounds containing a dibemethin group. National Phase Patent Application ARIPO AP/P/2011/005602. hitZeroth, i.i., mACleAn, J.m., rybiCKi, e.p. And WilliAmson, A-l. Expression of proteins in plants. Divisional Patent Application Europe 11162685.9. hitZeroth, i.i. And rybiCKi, e.p. HPV chimaeric particle. Provisional Patent Application South Africa 2011/08841. faCUlTy of sCIeNCe hunter, r., KAsChulA, C.h. And pArKer, m.i. Compounds useful for the inhibition of the growth of tumour cells. National Phase Patent Application South Africa 2011/01690. hunter, r., KAsChulA, C.h. And pArKer, m.i. Organosulfur compounds, a method of making organosulfur compounds and their use for inhibiting the growth of tumour cells. National Phase Patent Application China 200980139471.8. hunter, r., KAsChulA, C.h. And pArKer, m.i. Organosulfur compounds, a method of making organosulfur compounds and their use for inhibiting the growth of tumour cells. National Phase Patent Application India 739/DELNP/2011. hunter, r., KAsChulA, C.h. And pArKer, m.i. Organosulfur compounds, a method of making organosulfur compounds and their use for inhibiting the growth of tumour cells. National Phase Patent Application United States 13/057,960. illinG, n., stein, d.J. And vAn heerden, J.h. A method of diagnosing a mental state. National Phase Patent Application South Africa ZAxPCT/IB10/050768. illinG, n., stein, d.J. And vAn heerden, J.h. A method of diagnosing a mental state. National Phase Patent Application United States USxPCT/IB10/050768. JAyAKody, r.s. And nAidoo, K.J. Inhibitors of type II ribosome inactivating proteins. Provisional Patent Application South Africa 2011/06840. le, h. Medium access control in wireless sensor networks. PCT Patent Application PCT PCT/IB2011/000208. reid, s.J. Ostrich feed supplement. National Phase Patent Application Australia 2011218616. reid, s.J. Ostrich feed supplement. National Phase Patent Application Brazil BRxZA2010/6209. reid, s.J. Ostrich feed supplement. National Phase Patent Application South Africa 2011/06400. GRANTED Anderson, K. And hunter, r. Potent chimaeric NRTI-NNRTI bifunctional inhibitors of HIV-1 reverse transcriptase. National Phase Patent South Africa 2010/7066. 487
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20 11 University of Cape Town Resea
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2 Our Mission Statement UCT aspires
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4 UCT RESEARCH REPORT '11
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6 New UCT Fellow Professor Vanessa
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8 Professor Hans-Peter Kunzi was on
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10 NRF A-rated researcher Professor
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12 Dr Thomas Scriba, a finalist in
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14 Department of Research and Innov
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18 NSTF-BHP BILLITON 2011/12 WINNER
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20 Research funding is often used a
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26 Degree Awards Departmental funds
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30 POSTDOCTORAL RESEARCH FELLOWS (P
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32 Celebrating our new A- and P-rat
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34 Dr David Braun: Researching the
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36 NRF-rated researchers at UCT dur
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38 DST/NRF SARChI CHAIRS AT UCT Ani
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40 the signature themes are grounde
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42 From the lab to the market: cutt
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44 Drug and vaccine discovery given
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46 Testing the waters The Aquatest
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48 Dr George Vicatos, a mechanical
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50 Research themes CLIMATE CHANGE A
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52 Climate change UCT ReseaRCh Repo
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54 UCT launches a co-ordinated assa
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66 “Each of the (MeerKAT) project
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92 Computing power UCT ReseaRCh Rep
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94 The many applications of computi
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100 poverty and economics UCT Resea
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102 Turning the tide on poverty Whe
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108 engineering the economy UCT Res
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110 From resources to knowledge: th
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112 UCT’s Minerals to Metals rese
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114 Competence centre associated wi
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118 human biology UCT ReseaRCh Repo
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120 In praise and pursuit of the hu
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122 Research grouping associated wi
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124 physics UCT ReseaRCh RepoRT '11
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126 Solving the mysteries of the Un
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130 humanities footprint UCT ReseaR
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132 Making the case for humanities
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138 Brain behaviour UCT ReseaRCh Re
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140 The science of substance abuse
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144 DsT/NRF saRChI Chairs associate
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146 Urban challenges UCT ReseaRCh R
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148 Creating healthy and resilient
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152 Environment: the Centre for Tra
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154 The Constitution UCT ReseaRCh R
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156 Public values and private right
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160 DsT/NRF saRChI Chairs associate
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162 Research without borders UCT Re
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164 UCT stakes its claim on the int
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166 and must fulfill at least one o
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168 Research support UCT ReseaRCh R
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170 Looking after a new generation
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172 ways of generating new knowledg
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174 Faculty of Engineering & the Bu
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176 profile collaboration network,
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178 lewis, a.e. and naTHOO, J.a. Me
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180 scHOOl sTaTisTics permanent and
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182 governance. In O. Bodin and C.
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184 exhibitions Todeschini, F. 2011
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186 pOsTdOcTOral FellOws dr Mayeli
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188 Govender, I., Mangesana, N., Ma
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190 Mwase, J., Petersen, J. and Eks
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192 Bbosa, L.S., Govender, I., Main
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194 lessons. In Proceedings of the
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196 Cattell, D.W., Bowen, P.A. and
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198 dr a. MisHra Senior Lecturer; R
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200 Awodele, K.O. and Ip-Cho, N. 20
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202 Feliu Gutierrez, M.A. and Ventu
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204 Networks and Services Research
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206 July 2011, Cape Town. Cape Town
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214 Faculty of Law Dean’s report
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216 Doctoral graDuations P.H. Bamu
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218 Professor r. le roux Labour Law
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220 Zambia) under the UCT PERC Afri
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222 articles peer-reviewed Journals
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224 Professor H. mostert Law of Pro
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226 Department of public law (Inclu
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228 CeNtre of CrimiNology The Centr
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230 research assistant mr C.o. moit
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232 In 2011 the Unit launched its W
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234 African Constitutional Law: Bil
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236 Manjoo, R. and McRaith, C. 2011
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240 J.P. evANS (humAN biology) The
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242 m. twomey (PubliC heAlth AND FA
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248 DePArtmeNtAl StAtiStiCS permane
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250 peripheral neuropathies; congen
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252 researCH fielDs anD staff M. He
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256 permanent and long-term contrac
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258 CoNtACt DetAilS Postal Address:
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260 Cox, S., Cullingworth, L. and R
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262 Levin, M. and Weinberg, E.G. 20
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264 Rogers, A.D., Price, C., Wallis
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266 Department of clinical laBorato
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268 Divisional statistics permanent
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270 Dr l. liebeNberg Senior Special
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272 Senior house officers 2 Chief P
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274 use in a wide range of immunolo
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276 Dr mohloPheNi mArAkAlAlA Invest
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278 virNA leANer, bSC(hoNS) PhD CAP
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280 Dr lemeSe Ah tow Development of
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282 CobuS olivier HIV Immunology AN
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284 Danilov, S.M., Gordon, K., Nest
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286 Hosseini, A., Massumi, H., Heyd
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288 Mazandu, G.K. and Mulder, N.J.
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290 Roberts, T., Stephens, L.W., Sc
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292 Hermjakob, H. 2011. Dasty3, a W
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294 study that explores the capacit
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296 mS ShAmilA mANie Intensive Care
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298 Jelsma, J.M., Davids, N. and Fe
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300 South Africa’s most important
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302 ASSoCiAte ProFeSSor mArJANNe Se
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304 Dr roSS tuCker RUESSM: Research
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306 Hemmerich, A., van der Merwe, W
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312 reSeArCh FielDS AND StAFF ASSoC
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320 DiviSioN oF Neurology heAD oF D
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322 diseases unit provides inpatien
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324 G., Allwood, B., Dawson, R. and
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326 Gabriels, G.A., Lambert, M.I.,
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328 antiretroviral therapy in South
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330 Are interferon- release assays
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332 Opie, L.H. 2011. Glycaemia and
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334 Cornick, R., Faris, G.F. and Dr
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336 of Serum C-Reactive Protein as
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338 Dr ANNe horAk High risk obstetr
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340 primary health care Directorate
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342 child and adolescent psychiatry
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344 of adverse effect in fetal alco
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346 Stein, D.J., Bandelow, B., Meri
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348 Further, in addition to subsidy
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350 pesticide risk management is st
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352 • Two senior staff members ob
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354 system; human rights issues in
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356 Schuur Hospital, Cape Town, dur
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358 Harris, B., Goudge, J., Ataguba
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360 Mann, g., Thomson, R., Jin, C.,
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362 and Zwarenstein, M. 2011. From
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364 assistant managers (medical phy
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366 contract research staff part-ti
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368 de Boer, R.H., Arrieta, O., Yan
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370 segment surgery, corneal diseas
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372 DiviSioN oF emergeNCy meDiCiNe
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374 students Doctoral 1 master’s
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378 permanent and long term contrac
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380 auxilliary artery injuries. Sou
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382 Van Zyl, L. 2011. Severe bilate
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384 host of the world-renowned Jame
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386 m. mutowo (graDuatE School of B
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388 aSSociatE profESSor JEnnifEr ro
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392 Suleman (eds), Proceedings of S
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394 Steyn and E.M. Villeneuva (eds)
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396 Since 1999 SALDRU has run the a
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398 profESSor anthony Black Develop
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400 mr DaviD (chEn-wEi) tSEng Labou
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402 articles in peer-reviewed Journ
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404 The section is affiliated with
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406 school statistics professors 4
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408 Raubenheimer, H. 2011. Constrai
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410 South African women’s magazin
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412 Africa Can, pp. 371-399. Washin
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414 Faculty of Humanities Dean’s
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416 South African Art in Context Vo
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418 n. mAmmon (EnviRonmEntAl And gE
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420 REsEARch outPut edited books Ok
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422 AssociAtE PRofEssoR lEslEy mARx
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424 Ndlovu, M.W. 2011. The meaning
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426 chapters in books Alexander, J.
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428 Collection, Neu-Ulm/Burlafingen
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430 REsEARch outPut articles in pee
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432 Dance International: Produced a
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434 Mahali, A. 2011. “Piecing tog
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Page 458 and 459: 456 Liebl, L.B. 2011. Carmina Buran
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Page 478 and 479: 476 Sitas, A. 2011. The moving blac
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Page 482 and 483: 480 AIDS policy, AIDS denialism; AI
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Page 498 and 499: 496 De Blok, W.J.G. 2011. The MeerK
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536 feather disease virus isolates.
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538 dr s. sWArt Southern ocean Biog
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540 Shillington, F.A. 2011. Johann
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542 professor f.e. lubben Physics E
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544 Govender, I., Mangesana, N., Ma
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546 professor GrAhAm bArr Econometr
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548 Newling, J., Varughese, M., Bas
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550 depArtmentAl stAtistiCs permane
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552 Honorary professors professor d
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554 ContACt detAils Tel: +27 21 650
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556 Blattodea), with placement of a
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558 Marchante, H., Freitas, H. and
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560 a description of a new species
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562 Zetlmeisl, C., Hermann, J., Pet
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564 A new generation of university
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566 aCaDemIC DeVeLopment proGramme
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568 Dr howArD PeArCe Senior Lecture
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570 into entrepreneurial ventures:
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572 Centre For InFormatIon LIteraCY
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574 ASSoCIATe ProfeSSor SueLLen ShA
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