286 Hosseini, A., Massumi, H., Heydarnejad, J., Pour, A.H. and Varsani, A. <strong>2011</strong>. Characterisation of potato virus Y isolates from Iran. Virus Genes, 42: 128-140. Jansen van Rensburg, M., Madikane, E.V., Whitelaw, A.C., Chachage, M., Haffejee, S. and Elisha, B.G. <strong>2011</strong>. The dominant methicillin-resistant Staphylococcus aureus clone from hospitals in Cape Town has an unsual genotype: ST612. Clinical Microbiology and Infection, 17: 785-792. Jaspan, H.B., Liebenberg, L., Hanekom, W.A., Burgers, W., Coetzee, D.J., Williamson, A.-.L., Little, F., Myer, L., Coombs, R.W., Sodora, D. and Passmore, J.S. <strong>2011</strong>. Immune Activation in Female Genital Tract During HIV Infection Predicts Mucosal Cd4 Depletion and HIV Shedding. Journal of Infectious Diseases, 204: 1550-1556. Jelsma, J.M., Davids, N. and Ferguson, G. <strong>2011</strong>. The motor development of orphaned children with and without HIV: Pilot exploration of foster care and residential placement. BMC Pediatrics, 11:11. (7pp). http://www.biomedical. com/1471-2431/11/11. Jimenez, R.C., Salazar, G.A., Gel, B., Dopazo, J., Mulder, N.J. and Corpas, M. <strong>2011</strong>. myKaryoView: A Light-Weight Client for Visualization of Genomic Data. PLoS One, 6(10): e26345. (5pp) Jones, A., Roberts, F., Nickdel, M.B., Brombacher, F., McKenzie, A., Henriquez, F.L., Alexander, J. and Roberts, C. 2010. Il-33 receptor(T1/ST2) signalling is necessary to prevent the development of encephalitis in mice infected with Toxoplasma gondii. European Journal of Immunology, 40: 426-436. Jones, C.E., Naidoo, S., De Beer, C., Esser, M., Kampmann, B. and Hesseling, A. <strong>2011</strong>. Maternal HIV Infection and Antibody Responses Against Vaccine-Preventable Diseases in Uninfected Infants. Jama-Journal of the American Medical Association, 305(6): 576-584. Jones, E., Owen, P., Davidson, J.S., van der Merwe, L. and Rayner, B.L. <strong>2011</strong>. The R563Q mutation of the epithelial sodium channel beta-subunit is associated with hypertension. Cardiovascular Journal of Africa, 22: 241-244. Kaschula, C.H., Hunter, R., Hassan, H.T., Stellenboom, N., Cotton, J., Zhai, X.Q. and Parker, M.I. <strong>2011</strong>. Anti- Proliferative Activity of Synthetic Ajoene Analogues on Cancer Cell-Lines. Anti-Cancer Agents in Medicinal Chemistry, 11: 260-266. Kelley, B.P., Malfait, F., Bonafe, L., Baldridge, D., Homan, E., Symoens, s., Willaert, A., Elcioglu, N., Van Maldergem, L., Verellen-Dumoulin, C., Gillerot, Y., Napierala, D., Krakow, D., Beighton, P., Superti-Furga, A., De Paepe, A. and Lee, B. <strong>2011</strong>. Mutations in FKBP10 Cause Recessive Osteogenesis Imperfecta and Bruck Syndrome. Journal of Bone and Mineral <strong>Research</strong>, 26(3): 666-672. Kiravu, A., Gumbi, P., Mkhize, N., Olivier, A., Denny, L.A. and Passmore, J.S. <strong>2011</strong>. Evaluation of CD103 (E7) integrin expression by CD8 T cells in blood as a surrogate marker to predict cervical T cell responses in the female genital tract during HIV infection. Clinical Immunology, 141: 143-151. Kulkarni, A., Govender, D., Kotwal, G. and Kellaway, L.A. <strong>2011</strong>. Modulation of anxiety behavior by intranasally administered vaccinia virus complement control protein and curcumin in a mouse model of Alzheimer’s disease. Current Alzheimer <strong>Research</strong>, 8(1): 95-113. Kung, S.-.J., Fenemore, B. and Potter, P.C. <strong>2011</strong>. Anaphylaxis to Mopane worms (Imbrasia belina). Annals of Allergy Asthma & Immunology, 106(6): 538-540. Lawn, S.D., Brooks, S.V., Kranzer, K., Nicol, M.P., Whitelaw, A.C., Vogt, M.C., Bekker, L. and Wood, R. <strong>2011</strong>. Screening of HIV-associated tuberculosis and rifampicin resistance before antiretroviral therapy using the Xpert MTB/RIF assay: A prospective study. Plos Medicine, 8(7): e1001067. Lawn, S.D. and Nicol, M.P. <strong>2011</strong>. Xpert (R) MTB/RIF assay: development, evaluation and implementation of a new rapid molecular diagnostic for tuberculosis and rifampicin resistance. Future Microbiology, 6(9): 1067-1082. Lazarus, J. and Pillay, K. <strong>2011</strong>. Abdominal Tuberculosis Presenting as an Inguinal Hernia in a Child. Urology, 77(6): 1470-1471. Le Roux, D., Cotton, M., Le Roux, S., Whitelaw, A.C., Lombard, C. and Zar, H.J. <strong>2011</strong>. Bacteremia in human immunodeficiency virus-infected children in Cape Town, South Africa. Pediatric Infectious Disease Journal, 30(10): 904-906. Lefeuvre, P., Harkins, G.W., Lett, J.-.M., Briddon, R., Chase, M., Moury, B. and Martin, D.P. <strong>2011</strong>. evolutionary timescale of the begomviruses: eviodence from intergrated sequences in the nicotiana genome. PLoS One, 6(5): e19193. (10pp) Lewis, D.A. and Lukehart, S.A. <strong>2011</strong>. Antimicrobial resistance in Neisseria gonorrhoeae and Treponema pallidum:evolution, therapeutic challenges and the need to strengthen global surveillance. Sexually Transmitted Infections, 87: ii39-ii43. Liebenberg, L., Gamieldien, H., Mkhize, N., Jaumdally, S.Z., Gumbi, P., Denny, L.A. and Passmore, J.S. <strong>2011</strong>. Stability and transport of cervical cytobrushes for isolation of mononuclear cells from the female genital tract. Journal of Immunological Methods, 367: 47-55. Ligthelm, L.J., Nicol, M.P., Hoek, K.G.P., Jacobson, R., Van Helden, P., Marais, B., Warren, R.M. and Wright, C. <strong>UCT</strong> ReseARCh RepORT '11
<strong>2011</strong>. Xpert MTB/FIF for rapid diagnosis of tuberculous lymphadenitis from fine-needle-aspiration biospy specimens. Journal of Clinical Microbiology, 49(11): 3967-3970. Louw, V.J., Dreosti, L. and Novitzky, N. <strong>2011</strong>. Recommendations for the management of adult chronic myeloid leukaemia in South Africa. SAMJ South African Medical Journal, 101(11): 840-846. Machingaidze, S., Wiysonge, C.S., Gonzalez-Angulo, Y., Hatherill, M., Moyo, S., Hanekom, W.A. and Mahomed, H. <strong>2011</strong>. The Utility of an Interferon Gamma Release Assay for Diagnosis of Latent Tuberculosis Infection and Disease in Children. Pediatric Infectious Disease Journal, 30(8): 694-700. Maillet, I., Schnyder-Candrian, S., Couillin, I., Quesniaux, V., Erard, F., Moser, R., Fleury, H., Kanda, A., Dombrowicz, D., Szymkowski, D.E. and Ryffel, B. <strong>2011</strong>. Allergic Lung Inflammation Is Mediated by Soluble Tumor Necrosis Factor (TNF) and Attenuated by Dominant-Negative TNF Biologics. American Journal of Respiratory Cell and Molecular Biology, 45: 731-739. Mall, A.S., Lotz, Z., Tyler, M., Goldberg, P.A., Rodrigues, J.D.E.A., Kahn, D., Chirwa, N. and Govender, D. <strong>2011</strong>. Immunohistochemical and Biochemical Characterization of Mucin in Pseudomyxoma Peritonei: A Case Study. Gastroenterology, 5: 5-16. Magombedze, G., Chiyaka, C. and Mukandavire, Z. <strong>2011</strong>. Optimal control of malaria chemotherapy. Nonlinear Analysis-Modelling and Control, 16(4): 415-434. Marais, D.J., Gawarecki, D., Allan, B.R., Ahmed, K., Altini, L., Cassim, N., Gopolang, F.P., Hoffman, M., Ramjee, G. and Williamson, A.-.L. <strong>2011</strong>. The effectiveness of Carraguard, a vaginal microbicide, in protecting women against high-risk human papillomavirus infection. Antiviral Therapy, 16(8): 1219-1226. Marakalala, M., Kerrigan, A.M. and Brown, G.D. <strong>2011</strong>. Dectin-1: a role in antifungal defense and consequences of genetic polymorphisms in humans. Mammalian Genome, 22: 55-65. Marakalala, M., Guler, R., Matika, L., Murray, G., Jacobs, M., Brombacher, F., Rothfuchs, S., Sher, A. and Brown, G.D. <strong>2011</strong>. the Syk-CARD9-coupled receptor Dectin-1 is not required for host resistance to Mycobacterium tuberculosis in mice. Microbes and Infection, 13: 198-201. Maritz, M.F., van der Watt, P., Holderness, N.A., Birrer, M.J. and Leaner, V.D. <strong>2011</strong>. Inhibition of AP-1 suppresses cervical cancer proliferation and is associated with p21 expression. Biological Chemistry, 392: 439-448. FACULTY OF heALTh sCienCes Matejcic, M., Li, D., Prescott, N.J., Lewis, C.M., Mathew, C.G. and Parker, M.I. <strong>2011</strong>. Association of a deletion of GSTT2B with an altered risk of oesophageal squamous cell carcinoma in a South African population: A Case- Control study. PLoS One, 6(12). (e29366): 1-8. Martin, D.P., Lemey, P. and Posada, D. <strong>2011</strong>. Analysing recombination in nucleotide sequences. Molecular Ecology Resources, 11: 943-955. Martin, D.P., Lefeuvre, P., Varsani, A., Hoareau, M., Semegni, J.E., Dijoux, B., Vincent, C., Reynaud, B. and Lett, J.-.M. <strong>2011</strong>. complex recombination patterns arising during geminivirus coinfections preserve and demarcate biologically important intra-genome interaction networks. PLoS Pathogens, 7(9): e1002203. (14pp) Martin, D.P., Linderme, D., Lefeuvre, P., Shepherd, D.N. and Varsani, A. <strong>2011</strong>. Eragrostis minor streak virus:an Asian streak virus in Africa. Archives of Virology, 156(<strong>2011</strong>): 1299-1303. Martin, D.P., Biagini, P., Lefeuvre, P., Golden, M., Roumagnac, P. and Varsani, A. <strong>2011</strong>. Recombination in Eukaryotic single stranded DNA viruses. Viruses-Basel, 3: 1699-1738. Martin, D.P., Briddon, R. and Varsani, A. <strong>2011</strong>. Recombination patterns in dicot-infecting mastreviruses mirror those found in monocot-infecting mastreviruses. Archives of Virology, 156: 1463-1469. Martineau, A., Nhamoyebonde, S., Oni, T., Rangaka, M.X., Marais, S., Bangani, N.M., Tsekela, R., Bashe, L., De Azevedo, V., Caldwell, J., Venton, T.R., Timms, P.M., Wilkinson, K. and Wilkinson, R.J. <strong>2011</strong>. Reciprocal seasonal variation in vitamin D status and tuberculosis notifications in Cape Town, South Africa. Proceedings of the National Academy of Sciences of the United States of America, 108(47): 19013-19017. Martins, Q., Horsnell, W., Titus, W., Rautenbach, T. and Harris, S. <strong>2011</strong>. Diet Determination of the Cape mountain leopards using global positioning system location clusters and scat analysis. Journal of Zoology, 283: 81-87. Matthews, K., Wilkinson, K., Kalsdorf, B., Roberts, T., Diacon, A., Walzl, G., Wolske, J., Ntsekhe, M., Syed, F., Russell, J.B.W., Mayosi, B.M., Dawson, R., Dheda, K., Wilkinson, R.J., Hanekom, W.A. and Scriba, T.J. <strong>2011</strong>. Predominance of interleukin-22 over interleukin-17 at the site of disease in human tuberculosis. Tuberculosis, 91(6-3): 587-593. Mazandu, G.K., Opap, K. and Mulder, N.J. <strong>2011</strong>. Contribution of microarray data to the advancement of knowledge on the Mycobacterium tuberculosis interactome: use of the random partial least square approach. Infection Genetics And Evolution, 11: 181-189. 287
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480 AIDS policy, AIDS denialism; AI
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482 Faculty of Science Dean’s rep
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484 in Professor Kevin Naidoo, Prof
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486 m.f. munyololo (Chemistry) New
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488 britton, d.t. And hÄrtinG, m.
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490 emeritus professors professor n
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492 Department of astronomy (Includ
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494 reseArCh output articles in pee
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496 De Blok, W.J.G. 2011. The MeerK
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498 students postdoctoral 4 doctora
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500 February, E.C., Allsopp, N., Sh
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502 Schutz, A., Bond, W.J. and Cram
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504 AssoCiAte professor dAvid W. GA
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506 Cabrera, D.G., Douelle, F., Fen
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508 and Heck cross-coupling reactio
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510 secure data storage on the web.
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512 Kapuire, G. and Blake, E.H. 201
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514 has established itself as a cen
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516 dr Chris lennArd Atmospheric sc
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518 developing world fisheries. Law
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520 reseArCh output edited books Fa
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522 Rowe, C. and Backeberg, N. 2011
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524 dr mArGAret ArChibAld Lecturer;
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526 articles in peer-reviewed Journ
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528 Ellis, G.F.R. 2011. Shear free
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530 Uzan, J., Ellis, G.F.R. and Lar
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532 students post-doctoral 10 docto
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534 Galvao, B., Meggersee, R.L. and
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536 feather disease virus isolates.
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538 dr s. sWArt Southern ocean Biog
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540 Shillington, F.A. 2011. Johann
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542 professor f.e. lubben Physics E
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544 Govender, I., Mangesana, N., Ma
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546 professor GrAhAm bArr Econometr
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548 Newling, J., Varughese, M., Bas
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550 depArtmentAl stAtistiCs permane
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552 Honorary professors professor d
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554 ContACt detAils Tel: +27 21 650
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556 Blattodea), with placement of a
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558 Marchante, H., Freitas, H. and
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560 a description of a new species
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562 Zetlmeisl, C., Hermann, J., Pet
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564 A new generation of university
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566 aCaDemIC DeVeLopment proGramme
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568 Dr howArD PeArCe Senior Lecture
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570 into entrepreneurial ventures:
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572 Centre For InFormatIon LIteraCY
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574 ASSoCIATe ProfeSSor SueLLen ShA
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576 UCT REsEARCH REPORT '11