full report - UCT - Research Report 2011

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536 feather disease virus isolates. Journal of General Virology, 92: 752-767. Verhoog, N., Kotitschke, A., Avenant, C. and Hapgood, J. 2011. Glucocorticoid-independent repression of tumor necrosis factor (TNF) a-stimulated Interleukin(il)-6 expression by the glucocorticoid receptor. Journal of Biological Chemistry, 286(22): 19297-19310. Woodman, Z., Mlisana, K., Treurnicht, F., Abrahams, M.H., Thebus, R., Abdool Karim, S. and Williamson, C. 2011. Short communication: decreased incidence of dual infections in South African subtype C-infected women compared to a cohort ten years earlier. AIDS Research and Human Retroviruses, 27(11): 1167-1172. peer-reviewed published conference proceedings Chege, G., Burgers, W., Meyers, A.E., Stutz, H., Kiravu, A., Bunjun, R., Chapman, R.E., Shephard, E.G., Rybicki, E.P. and Williamson, A.-.L. 2011. A prime-boost immunization with an auxotrophic BCG expressing HIV-1Gag and Gag VLPs induces broad, polyfunctional memory T cell responses in baboons. In Proceedings of AIDS Vaccine 2011, 12-15 September 2011, Bangkok, Thailand. USA: Mary Ann Liebert Inc. ISSN 0889-2229. Van Hille, R.P., van Wyk, N., Motleleng, L. and Mooruth, N. 2011. Lessons in passive treatment: Towards efficient operation of a sulphate reduction - sulphide oxidation system. In T.R. Rude, A. Freund and C. Wolkersdorfer (eds), Proceedings of the 11th Congress of the International Mine Water Association, 4-11 September 2011, Aachen, Germany. Germany: RWTH Aachen University, Institute of Hydrogeology on behalf of the International Mine Water Association. ISBN 978-3-00-035543-1. Department of oceanoGrapHy (Including the Nansen-Tutu Centre for Marine Environmental Research and the Research Diving Unit) heAd of depArtment: professor Chris reAson depArtmentAl profile The Department of Oceanography is the only such Department in sub-Saharan Africa, and is the major focus for research in physical oceanography, atmospheric science, ocean circulation, and climate in South Africa and elsewhere in Africa. The Department has research groupings in sea-going observations, satellite marine remote sensing, coastal oceanography, ocean and atmospheric modelling, marine and coastal meteorology, severe weather, the science underpinning operational oceanography, and climate variability and change. Six scientists in the Department have been favourably evaluated in the review process of the National Research Foundation. Active international associations are maintained by collaborative projects with the Netherlands, France, Germany, Spain, the UK, Australia, USA and Canada. The Department maintains close contact with marine science activities in the governmental, private and academic sectors in South Africa and into Africa. The UCT Research Diving Unit (RDU) is housed within the Department and is fully equipped with a decompression chamber and compressor. Most scientific diving at UCT is carried out in conjunction with the RDU. depArtmentAl stAtistiCs permanent and long-term contract staff professors 2 senior lecturer 2 lecturer 1 research staff 1 technical support staff 2 Administrative and Clerical staff 2 total 10 Honorary staff emeritus professor 3 honorary professor 1 honorary research Associates 8 total 10 UCT ReseaRCh RepoRT '11
students postdoctoral fellows 9 doctoral 26 master’s 21 honours 10 undergraduate 158 total 224 reseArCh fields And stAff permanent staff professor C.J.C. reAson Head of Department; Southern Hemisphere climate variability and change; coastal and mesoscale meteorology, regional oceanography, modeling. professor f.A. shillinGton Shelf oceanography; satellite marine remote sensing. dr i.J. AnsorGe Senior Lecturer; Southern Ocean. dr h.n. WAldron Senior Lecturer; environmental oceanography. mr C. Whittle Senior Scientific Officer; satellite marine remote sensing. mr p. hAneKom Diving Supervisor; ocean diving. AdministrAtive offiCer Mrs C. Khai resourCe Centre offiCer Mrs N. Jabaar sarcHi professor s.G.h. philAnder Ocean-atmosphere numerical modeling. contract research staff dr m. rouAult Ocean-atmosphere interaction. emeritus professors professor G.b. brundrit Operational oceanography professor J.G. field Marine Research Institute faCUlTy of sCIeNCe professor J.r.e. lutJehArms Ocean climatology Honorary professors professor l.v. shAnnon Benguela ecosystem Honorary research associates dr s. bernArd Optical oceanography dr d. byrne Agulhas Current dr C. dunCombe rAe Coastal ocean dynamics dr K. findlAy Whales dr J. hermes Regional ocean modelling dr p. monteiro Environmental oceanography dr A. mAvume Tropical cyclones emeritus professor G. siedler Deep sea oceanography Distinguished visitors dr A. biAstoCh University of Kiel, Germany, Ocean numerical modelling postdoctoral fellows dr b. bACKeberG Agulhas Current modelling dr f. dufois Coastal oceanography dr n. fAuChereAu Air-sea interaction dr C. pAlmer Marine Chemistry dr n. rAsCle Climate and ocean modelling dr r. romAn Agulhas Current 537
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20 11 University of Cape Town Resea
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2 Our Mission Statement UCT aspires
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4 UCT RESEARCH REPORT '11
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6 New UCT Fellow Professor Vanessa
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8 Professor Hans-Peter Kunzi was on
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10 NRF A-rated researcher Professor
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12 Dr Thomas Scriba, a finalist in
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14 Department of Research and Innov
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16 Research Contracts and Intellect
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18 NSTF-BHP BILLITON 2011/12 WINNER
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20 Research funding is often used a
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22 SA Government Public Entities an
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24 international students at UCT ha
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26 Degree Awards Departmental funds
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28 Source Awards Non-SADC Internati
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30 POSTDOCTORAL RESEARCH FELLOWS (P
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32 Celebrating our new A- and P-rat
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34 Dr David Braun: Researching the
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36 NRF-rated researchers at UCT dur
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38 DST/NRF SARChI CHAIRS AT UCT Ani
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40 the signature themes are grounde
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42 From the lab to the market: cutt
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44 Drug and vaccine discovery given
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46 Testing the waters The Aquatest
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48 Dr George Vicatos, a mechanical
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50 Research themes CLIMATE CHANGE A
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52 Climate change UCT ReseaRCh Repo
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54 UCT launches a co-ordinated assa
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56 signature themes associated with
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58 Research groupings associated wi
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60 DsT/nRF saRChI Chairs associated
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62 astronomy UCT ReseaRCh RepoRT '1
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64 It’s written in the stars: Sou
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66 “Each of the (MeerKAT) project
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68 social and economic relevance UC
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70 The business of integrating rese
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74 Water research UCT ReseaRCh Repo
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76 UCT researchers combine to prote
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78 Research grouping associated wit
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80 Burden of disease UCT ReseaRCh R
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82 A big-picture view to reduce the
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84 signature theme associated with
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90 DsT/NRF saRChI Chairs associated
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92 Computing power UCT ReseaRCh Rep
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94 The many applications of computi
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98 “The HPC node ran its first UC
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100 poverty and economics UCT Resea
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102 Turning the tide on poverty Whe
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104 Research groupings associated w
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106 grants or other social spending
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108 engineering the economy UCT Res
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110 From resources to knowledge: th
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112 UCT’s Minerals to Metals rese
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114 Competence centre associated wi
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118 human biology UCT ReseaRCh Repo
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120 In praise and pursuit of the hu
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122 Research grouping associated wi
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124 physics UCT ReseaRCh RepoRT '11
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126 Solving the mysteries of the Un
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130 humanities footprint UCT ReseaR
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132 Making the case for humanities
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138 Brain behaviour UCT ReseaRCh Re
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140 The science of substance abuse
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144 DsT/NRF saRChI Chairs associate
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146 Urban challenges UCT ReseaRCh R
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148 Creating healthy and resilient
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152 Environment: the Centre for Tra
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154 The Constitution UCT ReseaRCh R
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156 Public values and private right
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160 DsT/NRF saRChI Chairs associate
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162 Research without borders UCT Re
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164 UCT stakes its claim on the int
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166 and must fulfill at least one o
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168 Research support UCT ReseaRCh R
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170 Looking after a new generation
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172 ways of generating new knowledg
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174 Faculty of Engineering & the Bu
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176 profile collaboration network,
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178 lewis, a.e. and naTHOO, J.a. Me
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180 scHOOl sTaTisTics permanent and
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182 governance. In O. Bodin and C.
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184 exhibitions Todeschini, F. 2011
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186 pOsTdOcTOral FellOws dr Mayeli
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188 Govender, I., Mangesana, N., Ma
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190 Mwase, J., Petersen, J. and Eks
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192 Bbosa, L.S., Govender, I., Main
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194 lessons. In Proceedings of the
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196 Cattell, D.W., Bowen, P.A. and
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198 dr a. MisHra Senior Lecturer; R
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200 Awodele, K.O. and Ip-Cho, N. 20
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202 Feliu Gutierrez, M.A. and Ventu
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204 Networks and Services Research
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206 July 2011, Cape Town. Cape Town
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208 Africa Telecommunication Networ
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210 assOciaTe prOFessOr BrandOn cOl
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212 cOnTacT deTails Postal Address:
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214 Faculty of Law Dean’s report
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216 Doctoral graDuations P.H. Bamu
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218 Professor r. le roux Labour Law
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220 Zambia) under the UCT PERC Afri
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222 articles peer-reviewed Journals
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224 Professor H. mostert Law of Pro
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226 Department of public law (Inclu
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228 CeNtre of CrimiNology The Centr
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230 research assistant mr C.o. moit
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232 In 2011 the Unit launched its W
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234 African Constitutional Law: Bil
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236 Manjoo, R. and McRaith, C. 2011
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238 The faculty also hosts eight of
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240 J.P. evANS (humAN biology) The
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242 m. twomey (PubliC heAlth AND FA
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244 GRANTED AChAryA, k.r. AND Sturr
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246 reSeArCh FielDS AND StAFF JAmeS
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248 DePArtmeNtAl StAtiStiCS permane
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250 peripheral neuropathies; congen
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252 researCH fielDs anD staff M. He
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254 Current studies are investigati
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256 permanent and long-term contrac
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258 CoNtACt DetAilS Postal Address:
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260 Cox, S., Cullingworth, L. and R
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262 Levin, M. and Weinberg, E.G. 20
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264 Rogers, A.D., Price, C., Wallis
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266 Department of clinical laBorato
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268 Divisional statistics permanent
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270 Dr l. liebeNberg Senior Special
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272 Senior house officers 2 Chief P
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274 use in a wide range of immunolo
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276 Dr mohloPheNi mArAkAlAlA Invest
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278 virNA leANer, bSC(hoNS) PhD CAP
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280 Dr lemeSe Ah tow Development of
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282 CobuS olivier HIV Immunology AN
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284 Danilov, S.M., Gordon, K., Nest
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286 Hosseini, A., Massumi, H., Heyd
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288 Mazandu, G.K. and Mulder, N.J.
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290 Roberts, T., Stephens, L.W., Sc
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292 Hermjakob, H. 2011. Dasty3, a W
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294 study that explores the capacit
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296 mS ShAmilA mANie Intensive Care
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298 Jelsma, J.M., Davids, N. and Fe
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300 South Africa’s most important
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302 ASSoCiAte ProFeSSor mArJANNe Se
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304 Dr roSS tuCker RUESSM: Research
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306 Hemmerich, A., van der Merwe, W
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308 O’Connell, K., Posthumus, M.
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310 Annual ISMRM Scientific Meeting
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312 reSeArCh FielDS AND StAFF ASSoC
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314 Develop, evaluate and implement
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318 the AlbertiNA AND wAlter SiSulu
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320 DiviSioN oF Neurology heAD oF D
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322 diseases unit provides inpatien
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324 G., Allwood, B., Dawson, R. and
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326 Gabriels, G.A., Lambert, M.I.,
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328 antiretroviral therapy in South
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330 Are interferon- release assays
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332 Opie, L.H. 2011. Glycaemia and
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334 Cornick, R., Faris, G.F. and Dr
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336 of Serum C-Reactive Protein as
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338 Dr ANNe horAk High risk obstetr
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340 primary health care Directorate
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342 child and adolescent psychiatry
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344 of adverse effect in fetal alco
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346 Stein, D.J., Bandelow, B., Meri
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348 Further, in addition to subsidy
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350 pesticide risk management is st
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352 • Two senior staff members ob
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354 system; human rights issues in
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356 Schuur Hospital, Cape Town, dur
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358 Harris, B., Goudge, J., Ataguba
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360 Mann, g., Thomson, R., Jin, C.,
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362 and Zwarenstein, M. 2011. From
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364 assistant managers (medical phy
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366 contract research staff part-ti
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368 de Boer, R.H., Arrieta, O., Yan
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370 segment surgery, corneal diseas
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372 DiviSioN oF emergeNCy meDiCiNe
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374 students Doctoral 1 master’s
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378 permanent and long term contrac
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380 auxilliary artery injuries. Sou
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382 Van Zyl, L. 2011. Severe bilate
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384 host of the world-renowned Jame
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386 m. mutowo (graDuatE School of B
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388 aSSociatE profESSor JEnnifEr ro
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390 rESEarch fiElDS anD Staff perma
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392 Suleman (eds), Proceedings of S
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394 Steyn and E.M. Villeneuva (eds)
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396 Since 1999 SALDRU has run the a
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398 profESSor anthony Black Develop
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400 mr DaviD (chEn-wEi) tSEng Labou
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402 articles in peer-reviewed Journ
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404 The section is affiliated with
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406 school statistics professors 4
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408 Raubenheimer, H. 2011. Constrai
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410 South African women’s magazin
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412 Africa Can, pp. 371-399. Washin
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414 Faculty of Humanities Dean’s
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416 South African Art in Context Vo
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418 n. mAmmon (EnviRonmEntAl And gE
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420 REsEARch outPut edited books Ok
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422 AssociAtE PRofEssoR lEslEy mARx
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424 Ndlovu, M.W. 2011. The meaning
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426 chapters in books Alexander, J.
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428 Collection, Neu-Ulm/Burlafingen
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430 REsEARch outPut articles in pee
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432 Dance International: Produced a
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434 Mahali, A. 2011. “Piecing tog
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436 PRofEssoR johAn mullER Curricul
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438 peer-reviewed published confere
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440 EmERitus PRofEssoR gEoffREy hug
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442 Schalkwyk, D.J. 2011. The impos
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444 Pissarra, M., Goniwe, T. and Ma
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446 and Cinema in Francophone West
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448 Hambidge, J.H. 2011. Alle grapp
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450 mR. williAm hAuBRich Brass, par
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452 Hofmeyr, H.P. 2011. Il poeta e
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454 Grace, J. 2011. “Concert in t
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456 Liebl, L.B. 2011. Carmina Buran
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458 Van Schalkwyk, A. 2011. Liszt 2
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460 Wanderer, J.R. 2011. On Vice an
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462 Cameron, R.G. and Milne, C. 201
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464 Carr, S.C., Bandawe, C.R., Mart
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466 Department of religious stuDies
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468 Mobilising Religious Health Ass
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470 PRof cARolyn hAmilton National
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472 Department of social DeVelopmen
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474 pedagogics in higher education;
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476 Sitas, A. 2011. The moving blac
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478 Steinberg, J. 2011. A bag of so
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480 AIDS policy, AIDS denialism; AI
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482 Faculty of Science Dean’s rep
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484 in Professor Kevin Naidoo, Prof
Page 488 and 489: 486 m.f. munyololo (Chemistry) New
Page 490 and 491: 488 britton, d.t. And hÄrtinG, m.
Page 492 and 493: 490 emeritus professors professor n
Page 494 and 495: 492 Department of astronomy (Includ
Page 496 and 497: 494 reseArCh output articles in pee
Page 498 and 499: 496 De Blok, W.J.G. 2011. The MeerK
Page 500 and 501: 498 students postdoctoral 4 doctora
Page 502 and 503: 500 February, E.C., Allsopp, N., Sh
Page 504 and 505: 502 Schutz, A., Bond, W.J. and Cram
Page 506 and 507: 504 AssoCiAte professor dAvid W. GA
Page 508 and 509: 506 Cabrera, D.G., Douelle, F., Fen
Page 510 and 511: 508 and Heck cross-coupling reactio
Page 512 and 513: 510 secure data storage on the web.
Page 514 and 515: 512 Kapuire, G. and Blake, E.H. 201
Page 516 and 517: 514 has established itself as a cen
Page 518 and 519: 516 dr Chris lennArd Atmospheric sc
Page 520 and 521: 518 developing world fisheries. Law
Page 522 and 523: 520 reseArCh output edited books Fa
Page 524 and 525: 522 Rowe, C. and Backeberg, N. 2011
Page 526 and 527: 524 dr mArGAret ArChibAld Lecturer;
Page 528 and 529: 526 articles in peer-reviewed Journ
Page 530 and 531: 528 Ellis, G.F.R. 2011. Shear free
Page 532 and 533: 530 Uzan, J., Ellis, G.F.R. and Lar
Page 534 and 535: 532 students post-doctoral 10 docto
Page 536 and 537: 534 Galvao, B., Meggersee, R.L. and
Page 540 and 541: 538 dr s. sWArt Southern ocean Biog
Page 542 and 543: 540 Shillington, F.A. 2011. Johann
Page 544 and 545: 542 professor f.e. lubben Physics E
Page 546 and 547: 544 Govender, I., Mangesana, N., Ma
Page 548 and 549: 546 professor GrAhAm bArr Econometr
Page 550 and 551: 548 Newling, J., Varughese, M., Bas
Page 552 and 553: 550 depArtmentAl stAtistiCs permane
Page 554 and 555: 552 Honorary professors professor d
Page 556 and 557: 554 ContACt detAils Tel: +27 21 650
Page 558 and 559: 556 Blattodea), with placement of a
Page 560 and 561: 558 Marchante, H., Freitas, H. and
Page 562 and 563: 560 a description of a new species
Page 564 and 565: 562 Zetlmeisl, C., Hermann, J., Pet
Page 566 and 567: 564 A new generation of university
Page 568 and 569: 566 aCaDemIC DeVeLopment proGramme
Page 570 and 571: 568 Dr howArD PeArCe Senior Lecture
Page 572 and 573: 570 into entrepreneurial ventures:
Page 574 and 575: 572 Centre For InFormatIon LIteraCY
Page 576 and 577: 574 ASSoCIATe ProfeSSor SueLLen ShA
Page 578 and 579: 576 UCT REsEARCH REPORT '11
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