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Polymers in Confined Geometry.pdf

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78 APPENDIX A. DISCRETE WORM-LIKE CHAIN CORRELATIONS<br />

The persistence length lp was def<strong>in</strong>ed through the spatial tangent-tangent<br />

correlation function <strong>in</strong> eq. (2.12), which is for the discrete model<br />

<br />

<br />

ˆtm · ˆtn = exp −|m − n| l<br />

<br />

. (A.5)<br />

To derive the relation between k and lp the correlation function is calculated<br />

us<strong>in</strong>g eq. (A.4)<br />

<br />

1 N<br />

<br />

ˆtm · ˆtn =<br />

dˆti ˆtm · ˆtn<br />

−βH({ki}) <br />

e <br />

Z({ki})<br />

<br />

i=1<br />

{ki=k}<br />

<br />

1 N<br />

<br />

=<br />

dˆti ˆtm · ˆtm+1<br />

ˆtm+1 · ˆtm+2 · · ·<br />

Z({ki})<br />

i=1<br />

· · · <br />

<br />

ˆtn−1 · ˆtn<br />

−βH({ki}) <br />

e <br />

<br />

{ki=k}<br />

1 ∂<br />

=<br />

Z({ki})<br />

|m−n| <br />

Z({ki}) <br />

<br />

∂km · · · ∂kn−1 {ki=k}<br />

(A.3)<br />

(A.4) 1<br />

=<br />

I0(k) N−1<br />

∂ |m−n|<br />

<br />

N−1 <br />

<br />

I0(ki) , (A.6)<br />

∂km · · · ∂kn−1 <br />

i=1 {ki=k}<br />

where <strong>in</strong> the second l<strong>in</strong>e <br />

ˆti · ˆti+2 = ˆti · ˆti+1<br />

ˆti+1 · ˆti+2 has been used, which<br />

can be seen by writ<strong>in</strong>g the product of tangents as the cos<strong>in</strong>es, us<strong>in</strong>g trigonometric<br />

theorems and the properties of the averages. For the 3D case below it is shown<br />

<strong>in</strong> [24, p. 377].<br />

Now us<strong>in</strong>g [1, (9.6.28)] <strong>in</strong> the form I ′ 0(k) = I1(k) gives<br />

|m−n|<br />

I1(k)<br />

ˆtm · ˆtn =<br />

I0(k)<br />

which results <strong>in</strong> the desired relation <strong>in</strong> 2D<br />

−1 I1(k)<br />

2D: lp = −l ln<br />

I0(k)<br />

lp<br />

!<br />

= (A.5), (A.7)<br />

. (A.8)<br />

For a given value of lp, k has to be determ<strong>in</strong>ed numerically, s<strong>in</strong>ce this formula is<br />

not <strong>in</strong>vertible <strong>in</strong> a closed form.<br />

A similar calculation, follow<strong>in</strong>g the above l<strong>in</strong>es, can be done for three dimension.<br />

By substitut<strong>in</strong>g dˆti = dφi dcos θi, we obta<strong>in</strong> for the partition function<br />

Z3D({ki}) = (4π) N<br />

N−1 <br />

i=1<br />

s<strong>in</strong>h ki<br />

, (A.9)<br />

ki

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