Colletotrichum: complex species or species ... - CBS - KNAW

Damm et al.
Masaba DM, Waller JM (1992). Coffee berry disease: The current status. In JA
Bailey & MJ Jeger (Eds.), Colletotrichum: Biology, Pathology and Control:
237–249. Wallingford: CAB International.
Mason-Gamer RJ, Kellogg EA (1996). Testing for phylogenetic conflict among
molecular data sets in the tribe Triticeae (Gramineae). Systematic Biology 45:
524–545.
Mejía LC, Enith I, Rojas EI, Maynard Z, Van Bael S, Arnold AE, Hebbar P, Samuels
GJ, Robbins N, Herre EA (2008). Endophytic fungi as biocontrol agents of
Theobroma cacao pathogens. Biological Control 46: 4–14.
Misra AK (2004). Guava diseases – their symptoms, causes and management.
In: Diseases of fruits and vegetables. Diagnosis and management Volume 2.
(Naqvi SAMH. ed.). Kluwer Academic Publishers, Dordrecht: 81–119.
Morris MJ (1982). Biological control of Hakea by a fungus.Veld & Flora 68: 51–52.
Mułenko W, Majewski T, Ruszkiewicz-Michalska M (2008). A preliminary checklist
of micromycetes in Poland. W. Szafer Institute of Botany. Polish Academy of
Sciences 9: 1–752.
Nakaune R, Nakano M (2007). Benomyl resistance of Colletotrichum acutatum
is caused by enhanced expression of beta-tubulin 1 gene regulated by
putative leucine zipper protein CaBEN1. Fungal Genetics and Biology 44:
1324–1335.
Nattrass RM (1928). The Physalospora disease of the basket willow. Transactions
of the British Mycological Society 13: 286–304.
Natural History Museum (2011). http://www.nhm.ac.uk/research-curation/research/
projects/sloane-herbarium/hanssloane.htm, accessed 21/12/2011.
Neergaard P (1943). 8. Aarsberetning fra J. E. Ohlens Enkes Plantepatologiske
Laboratorium 1. April 1942–31. Marts 1943. J. D. Qvist & Komp. Bogtrykkeri
Akts., København, Danmark.
Neergaard P (1950). Mycological Notes III. 7. Colletotrichum godetiae Neerg. 8.
Phoma bellidis Neerg. 9. Zygosporium parasiticum (Grove) Bunting & Mason.
10. Peronospora dianthicola Barthelet. Friesia 4: 72–80.
Nguyen PTH, Vinnere Pettersson O, Olsson P, Liljeroth E (2010). Identification
of Colletotrichum species associated with anthracnose disease of coffee in
Vietnam. European Journal of Plant Pathology 127: 73–87.
Nguyen THP, Säll T, Bryngelsson T, Liljeroth E (2009). Variation among
Colletotrichum gloeosporioides isolates from infected coffee berries at different
locations in Vietnam. Plant Pathology 58: 898–909.
Nirenberg HI (1976). Untersuchungen über die morphologische und biologische
Differenzierung in der Fusarium-Sektion Liseola. Mitteilungen aus der
Biologischen Bundesanstalt für Land- und Forstwirtschaft Berlin-Dahlem 169:
1–117.
Nirenberg HI, Feiler U, Hagedorn G (2002). Description of Colletotrichum lupini
comb. nov. in modern terms. Mycologia 94: 307–320.
Nirenberg HI, Gerlach W. (2000). Bestimmung und Pathogenitätsnachweis des
Erregers der Anthraknose an Bergenien. Nachrichtenblatt des Deutschen
Pflanzenschutzdienstes 52: 1–4.
Nylander JAA (2004). MrModeltest v2. Program distributed by the author.
Evolutionary Biology Centre, Uppsala University.
O’Donnell K, Cigelnik E (1997). Two divergent intragenomic rDNA ITS2 types within
a monophyletic lineage of the fungus Fusarium are nonorthologous. Molecular
Phylogenetics and Evolution 7:103–116.
Parikka P, Pääskynkivi E, Lemmetty A (2006). Colletotrichum acutatum: survival in
plant debris and infection on alternate hosts. NJF Report 2(10): 37.
Pennycook SR (1989). Plant diseases recorded in New Zealand Vol. 3, Plant
Diseases Division, DSIR, Auckland, New Zealand.
Peredo HL, Osorio M, Santamaría A (1979). Colletotrichum acutatum f. sp.pinea, a
new pathogen of Pinus radiata on nurseries in Chile. Plant Disease Reporter
63: 121–122.
Peres NAR, Kuramae EE, Dias MSC, Souza NL de (2002). Identification and
characterization of Colletotrichum spp. affecting fruit after harvest in Brazil.
Journal of Phytopathology 150: 128–134.
Peres NA, MacKenzie SJ, Peever TL, Timmer LW (2008). Postbloom fruit drop
of citrus and Key lime anthracnose are caused by distinct populations of
Colletotrichum acutatum. Phytopathology 98: 345–352.
Peres NA, Timmer LW, Adaskaveg JE, Correll JC (2005). Life styles of Colletotrichum
acutatum. Plant Disease 89: 784–796.
Petch T (1906). Descriptions of new Ceylon fungi. Annals of the Royal Botanical
Gardens, Peradeniya 3(1): 1–10.
Petch T (1917). Additions to Ceylon fungi. Annals of the Royal Botanic Gardens,
Peradeniya 6(3): 195–256.
Petch T (1927). Diseases and Pests of the Rubber Tree. Macmillan, London, UK.
Petrak F (1925). Mykologische Notizen. VIII. Annales Mycologici 23: 1–143.
Phoulivong S, Cai L, Chen H, McKenzie EHC, Abdelsalam K, Hyde KD, Chukeatirote
E (2010). Colletotrichum gloeosporioides is not a common pathogen on tropical
fruits. Fungal Diversity 44: 33–43.
Polashock JJ, Oudemans PV, Caruso FL, Mcmanus P, Crouch J (2009). Population
structure of the North American cranberry fruit rot complex. Plant Pathology
58: 1116–1127.
Polizzi G, Aiello D, Guarnaccia V, Vitale A, Perrone G, Stea G (2011). First report
of damping-off on strawberry tree caused by Colletotrichum acutatum and C.
simmondsii in Italy. Plant Disease 95: 1588.
Prihastuti H, Cai L, Chen H, McKenzie EHC, Hyde KD (2009). Characterization
of Colletotrichum species associated with coffee berries in northern Thailand.
Fungal Diversity 39: 89–109.
Rahman M, Louws FJ (2008). Colletotrichum gloeosporioides on strawberry: From
nursery to fruiting field. In: Colletotrichum Diseases of Fruit Crops (Peres NA,
Timmer LW, eds). Pre-Congress workshop, ICPP 2008, August 24, Torino,
Italy: 54.
Rambaut A (2002). Sequence Alignment Editor. Version 2.0. University of Oxford,
Oxford, UK.
Ramos AP, Merali Z, Talhinhas P, Sreenivasaprasad S, Oliveira H (2006). Molecular
and morphological characterisation of Colletotrichum species involved in citrus
anthracnose in Portugal. IOBC/WPRS Bulletin 29: 317–326.
Rayner RW (1970). A mycological colour chart. Commonwealth Mycological
Institute, Kew, UK.
Robideau GP, Caruso FL, Oudemans PV, McManus PS, Renaud M-A, Auclair
M-E, Bilodeau GJ, Yee D, Désaulniers NL, DeVerna JW, Lévesque CA (2008).
Detection of cranberry fruit rot fungi using DNA array hybridization. Canadian
Journal of Plant Pathology 30: 226–240.
Rojas EI, Rehner SA, Samuels GJ, Van Bael SA, Herre EA, Cannon PF, Chen R,
Pang J-f, Wang R-w, Zhang Y-p, Sha T (2010). Colletotrichum gloeosporioides
s.l. associated with Theobroma cacao and other plants in Panama: multilocus
phylogenies distinguish pathogen and endophyte clades. Mycologia 102:
1318–1338.
Ronquist F, Huelsenbeck JP (2003). MrBayes 3: Bayesian phylogenetic inference
under mixed models. Bioinformatics 19: 1572–1574.
Rostrup FGE (1891). Bidrag til kundskaben om Norges soparter. II. Ascomycetes fra
Dovre. Christiana Videnskabs-Selskabs Forhandlinger 9: 1–14.
Saccardo PA (1884). Sylloge Fungorum vol. 3. Padova, Italy.
Saccardo PA (1896). Fungi aliquot Brasilienses phyllogeni. Bulletin de la Société
Royale de Botanique Belgique 35: 127–132.
Saccardo PA (1899). Sylloge Fungorum vol. 14. Padova, Italy.
Saccardo PA (1906). Sylloge Fungorum vol. 18. Padova, Italy.
Saccardo PA, Trotter A (1913). Sylloge Fungorum vol. 22. Padova, Italy.
Saccardo PA, Saccardo D, Traverso JB, Trotter A (1931). Sylloge Fungorum vol.
25. Padova, Italy.
Saha T, Kumar A, Ravindran M, Jacobs K, Roy B, Nazeer MA (2002). Identification of
Colletotrichum acutatum from rubber using random amplified polymorhic DNAs
and ribosomal DNA polymorphisms. Mycological Research 106: 215–221.
Sang MK, Kim JD, Kim BS, Kim KD (2011). Root treatment with rhizobacteria
antagonistic to Phytophthora blight affects anthracnose occurrence, ripening,
and yield of pepper fruit in the plastic house and field. Phytopathology 101:
666–678.
Sawada K (1943). Descriptive catalogue of the Formosan fungi. Part VIII. Report
of the Department of Agriculture, Government Research Institute of Formosa
85: 1–130.
Sawada K (1959). Descriptive catalogue of Taiwan (Formosan) fungi. XI. Special
Publication, College of Agriculture, National Taiwan University 8: 1–268.
Schiller M, Lübeck M, Sundelin T, Meléndez LFC, Danielsen S, Jensen DF,
Ordeñana KM (2006). Two subpopulations of Colletotrichum acutatum are
responsible for anthracnose in strawberry and leatherleaf fern in Costa Rica.
European Journal of Plant Pathology 116: 107–118.
Schrenk H von, Spaulding P (1903a). The bitter rot fungus. Science n.s. 17: 750–
751.
Schrenk H von, Spaulding P (1903b). The bitter rot of apples. United States
Department of Agriculture Bureau of Plant Industry Bulletin 44: 1–54, 9 plates.
Schroeter J (1894). Die Pilze Schlesiens. In: Kryptogamen-Flora von Schlesien 2
(Cohn F, ed). J.U. Kern’s Verlag, Breslau: 257–384.
Sette LD, Passarini MRZ, Delarmelina C, Salati F, Duarte MCT. (2006). Molecular
characterization and antimicrobial activity of endophytic fungi from coffee
plants. World Journal of Microbiology and Biotechnology 11: 1185–1195.
Shear CL (1907). New species of fungi. Bullentin of the Torrey Botanical Club 34
(6): 305–317.
Sherriff C, Whelan MJ, Arnold GM, Lafay JF, Brygoo Y, Bailey JA (1994). Ribosomal
DNA sequence analysis reveals new species groupings in the genus
Colletotrichum. Experimental Mycology 18: 121–138.
Shivas RG, Tan YP (2009). A taxonomic re-assessment of Colletotrichum acutatum,
introducing C. fioriniae comb. et stat. nov. and C. simmondsii sp. nov. Fungal
Diversity 39: 111–122.
Simmonds JH (1965). A study of the species of Colletotrichum causing ripe fruit
rots in Queensland. Queensland Journal of Agricultural and Animal Science
22: 437–459.
Simmonds JH (1968). Type specimens of Colletotrichum gloeosporioides var. minor
and Colletotrichum acutatum. Queensland Journal of Agricultural and Animal
Science 25: 178A.
112