Colletotrichum: complex species or species ... - CBS - KNAW
Colletotrichum: complex species or species ... - CBS - KNAW
Colletotrichum: complex species or species ... - CBS - KNAW
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The <strong>Colletotrichum</strong> acutatum <strong>species</strong> <strong>complex</strong><br />
99<br />
1.00<br />
1 change<br />
91<br />
100<br />
1.00<br />
0.97<br />
1.00<br />
72<br />
<strong>CBS</strong> 128517 Fi<strong>or</strong>inia USA<br />
<strong>CBS</strong> 129931 Malus USA<br />
<strong>CBS</strong> 981.69 Coffea Angola<br />
<strong>CBS</strong> 129932 Malus USA<br />
<strong>CBS</strong> 112995 Malus USA<br />
<strong>CBS</strong> 125396 Malus USA<br />
<strong>CBS</strong> 127538 Malus USA<br />
IMI 324996 Malus USA<br />
<strong>CBS</strong> 127611 Fragaria USA<br />
<strong>CBS</strong> 786 86 Malus Italy<br />
<strong>CBS</strong> 126523 Berberis NL<br />
<strong>CBS</strong> 129940 Grevillea Germany<br />
<strong>CBS</strong> 129941 Grevillea Germany<br />
<strong>CBS</strong> 124958 Pyrus USA<br />
ATCC 12097 Rhododendron USA<br />
<strong>CBS</strong> 293.67 Persea Australia<br />
IMI 363003 Camellia China<br />
<strong>CBS</strong> 126508 Vaccinium NL<br />
<strong>CBS</strong> 126509 Vaccinium NL<br />
<strong>CBS</strong> 127537 Vaccinium USA<br />
<strong>CBS</strong> 124962 Solanum USA<br />
<strong>CBS</strong> 124963 Solanum USA<br />
<strong>CBS</strong> 125956 Penstemon NL<br />
<strong>CBS</strong> 126526 Primula NL<br />
<strong>CBS</strong> 235.49 unknown unknown<br />
CSL 1295 Fragaria UK<br />
IMI 324991 Piper unknown<br />
CSL 473 Liriodendron UK<br />
<strong>CBS</strong> 129916 Vaccinium USA<br />
<strong>CBS</strong> 129948 Tulipa UK<br />
<strong>CBS</strong> 200.35 Rubus USA<br />
<strong>CBS</strong> 129938 Malus USA<br />
<strong>CBS</strong> 126381 Malus NL<br />
<strong>CBS</strong> 127614 Fragaria USA<br />
<strong>CBS</strong> 125970 Cyclamen Italy<br />
<strong>CBS</strong> 167.86 Myriophyllum USA<br />
<strong>CBS</strong> 129930 Malus NZ<br />
<strong>CBS</strong> 128555 Malus NZ<br />
<strong>CBS</strong> 127600 Persea Australia<br />
<strong>CBS</strong> 127601 Mangifera Australia<br />
<strong>CBS</strong> 119186 Vaccinium NZ<br />
<strong>CBS</strong> 490.92 Solanum unknown<br />
IMI 345583 Fragaria NZ<br />
IMI 345578 Fragaria NZ<br />
CSL 318 Magnolia UK<br />
<strong>CBS</strong> 127599 Persea Australia<br />
<strong>CBS</strong> 119292 Vaccinium NZ<br />
<strong>CBS</strong> 128529 Fragaria NZ<br />
IMI 345575 Fragaria NZ<br />
<strong>CBS</strong> 128498 Actinidia NZ<br />
IMI 384569 Kalmia USA<br />
<strong>CBS</strong> 129946 Olea P<strong>or</strong>tugal<br />
<strong>CBS</strong> 129947 Vitis P<strong>or</strong>tugal<br />
ATCC 28992 Malus USA<br />
<strong>CBS</strong> 119293 Vaccinium NZ<br />
<strong>CBS</strong> 112996 Carica Australia<br />
<strong>CBS</strong> 113599 Grevillea Australia<br />
<strong>CBS</strong> 113600 Grevillea Australia<br />
87 <strong>CBS</strong> 111993 Grevillea Australia<br />
<strong>CBS</strong> 369.73 Lupinus NZ<br />
0.99 <strong>CBS</strong> 370.73 Pinus NZ<br />
<strong>CBS</strong> 371.73 Pinus NZ<br />
IMI 223120 Anemone Australia<br />
<strong>CBS</strong> 128499 Pyrus NZ<br />
<strong>CBS</strong> 110735 Pinus ZA<br />
<strong>CBS</strong> 112979 Pinus ZA<br />
<strong>CBS</strong> 112980 Pinus ZA<br />
<strong>CBS</strong> 112981 Pinus ZA<br />
<strong>CBS</strong> 127534 Pinus ZA<br />
<strong>CBS</strong> 127602 Fragaria Australia<br />
<strong>CBS</strong> 112990 Leucadendron ZA<br />
<strong>CBS</strong> 112994 Leucospermum ZA<br />
<strong>CBS</strong> 115202 Leucadendron ZA<br />
<strong>CBS</strong> 127598 Olea ZA<br />
<strong>CBS</strong> 115393 Mimetes ZA<br />
<strong>CBS</strong> 126521 Anemone NL<br />
<strong>CBS</strong> 129919 Hoodia ZA<br />
<strong>CBS</strong> 127539 Aspalathus ZA<br />
<strong>CBS</strong> 127542 Aspalathus ZA<br />
<strong>CBS</strong> 129921 Aspalathus ZA<br />
<strong>CBS</strong> 129922 Aspalathus ZA<br />
<strong>CBS</strong> 127543 Aspalathus ZA<br />
<strong>CBS</strong> 127545 Aspalathus ZA<br />
<strong>CBS</strong> 129914 Aspalathus ZA<br />
<strong>CBS</strong> 129915 Aspalathus ZA<br />
<strong>CBS</strong> 129925 Aspalathus ZA<br />
<strong>CBS</strong> 126505 Lobelia NL<br />
<strong>CBS</strong> 126506 Phlox NL<br />
CSL 287 Statice UK<br />
IMI 336479 Pistacia Australia<br />
IMI 384175 Nerium NZ<br />
<strong>CBS</strong> 129920 Hoodia ZA<br />
<strong>CBS</strong> 127544 Hoodia ZA<br />
<strong>CBS</strong> 127540 Aspalathus water ZA<br />
<strong>CBS</strong> 129923 Aspalathus water ZA<br />
<strong>CBS</strong> 129924 Aspalathus water ZA<br />
<strong>CBS</strong> 127546 Aspalathus water ZA<br />
<strong>CBS</strong> 127541 Aspalathus ZA<br />
<strong>CBS</strong> 112759 Hakea ZA<br />
<strong>CBS</strong> 112760 Hakea ZA<br />
96 <strong>CBS</strong> 112761 Hakea ZA<br />
<strong>CBS</strong> 112993 Hakea ZA<br />
100 1.00 <strong>CBS</strong> 113007 Hakea ZA<br />
0.87 <strong>CBS</strong> 113008 Hakea ZA<br />
1.00 <strong>CBS</strong> 113009 Hakea ZA<br />
IMI 216370 Coffea Tanzania<br />
IMI 319423 Coffea Kenya<br />
<strong>CBS</strong> 129952 Olea P<strong>or</strong>tugal<br />
<strong>CBS</strong> 113006 Protea ZA<br />
94 <strong>CBS</strong> 979.69 Coffea Kenya<br />
1.00 <strong>CBS</strong> 144.29 Capsicum Sri Lanka<br />
C. fi<strong>or</strong>iniae<br />
C. acutatum<br />
A3<br />
A5<br />
C1<br />
C2<br />
C3<br />
J4<br />
Clade 4 Clade 3<br />
Fig. 1. (Continued).<br />
The analyses resulted in detection of five main clades and<br />
29 subclades within C. acutatum s. lat., which we accept as<br />
representing different <strong>Colletotrichum</strong> <strong>species</strong>. The c<strong>or</strong>responding<br />
groups acc<strong>or</strong>ding to Sreenivasaprasad & Talhinhas (2005,<br />
numbers beginning with A) and Guerber et al. (2003, mtDNA<br />
RFLP haplotypes, numbers beginning with C...K), which are the<br />
most differential and comparable studies, are listed in brackets<br />
below and are indicated in the phylogenetic tree (Fig. 1). The<br />
www.studiesinmycology.<strong>or</strong>g<br />
41
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