surveying expression in marine organisms. (iii) Cell-based assays for functional characterizationand pathway mapping, including a core platform for automated cell-based assays for up to 75.000parallel experimental conditions (e.g. genome-wide siRNA approaches). This platform presentlycollaborates with cell biology groups focused on inflammation pathway research, alternativesplicing (Hiller et al. 2004) and on the elucidation of developmental and innate immune processesin cnidarians and urochordates (Wittlieb et al. 2006). (iv) A platform for proteome analysis iscurrently under construction and is strengthened by the integration of proteome-driven researchagendas from the Institute of Botany. (v) A population-representative DNA biobank (PopGen), withmore than 50,000 DNA samples from disease cohorts and population controls from northernSchleswig-Holstein, uses a LIMS system and an integrated database which supports GLPstandards in most parts of the operation and provides automated analysis procedures for efficientdata handling.As a result of their versatility and standardization, the platforms of the P3 project, whichare now primarily used for the systematic analysis of biological processes in humans,plants and freshwater animals, will be adapted to the needs of the Cluster projects. Thiswill permit a further understanding of the genomic biology of marine organisms and willalso address questions regarding diversity in populations.Schematic structure of the Cluster platform103
4. New Cluster TechnologiesA special emphasis of the platform will be the development of a core facility for transgenic marinemodel organisms. Existing expertise on Hydra (Wittlieb 2006) and Phaeodactylum tricornutum(diatom) transgenic technology will be an excellent starting point for the creation of transgenicanimals which can be brought into defined and genetically modified microbial interactions. <strong>The</strong>segenetically modified organisms will be prerequisite for the marine biology projects of the Clusterand can be used for functional in vivo studies which dissect the pathways of barrier function,screen marine substance libraries and elucidate complex host/microbial interactions in B2.<strong>The</strong>Cluster is designed to set up an automated live microscopy facility (e.g. a Cellomics® instrument)in the ZMB for advanced high-content image analysis of single cells and model organisms. Thisplatform will be instrumental in generating multidimensional image data sets from numerousexperimental conditions in parallel. It will be complimentary to the high-throughput cell-based assayplatform and will be able to delineate morphological readouts which cannot be assessed by simplemolecular biology assays (e.g. developmental processes or cell motility).ReferencesHampe J, Cuthbert A, Croucher PJ, Mirza MM, Mascheretti S, Fisher S, Frenzel H, King K,Hasselmeyer A, MacPherson AJ, Bridger S, van Deventer S, Forbes A, Nikolaus S, Lennard-Jones JE, Foelsch UR, Krawczak M, Lewis C, Schreiber S, Mathew CG (2001) Associationbetween insertion mutation in NOD2 gene and Crohn's disease in German and Britishpopulations. Lancet. 357, 1925-8.Stoll M, Corneliussen B, Costello CM, Waetzig GH, Mellgard B, Koch WA, Rosenstiel P, AlbrechtM, Croucher PJ, Seegert D, Nikolaus S, Hampe J, Lengauer T, Pierrou S, Foelsch UR,Mathew CG, Lagerstrom-Fermer M, Schreiber S (2004) Genetic variation in DLG5 isassociated with inflammatory bowel disease. Nat Genet. 36, 476-80.Valentonyte R, Hampe J, Huse K, Rosenstiel P, Albrecht M, Stenzel A, Nagy M, Gaede KI,Franke A, Haesler R, Koch A, Lengauer T, Seegert D, Reiling N, Ehlers S, Schwinger E,Platzer M, Krawczak M, Muller-Quernheim J, Schurmann M, Schreiber S (2005) Sarcoidosisis associated with a truncating splice site mutation in BTNL2. Nat Genet. 37, 357-64.Spanagel R, Pendyala G, Abarca C, Zghoul T, Sanchis-Segura C, Magnone MC, Lascorz J,Depner M, Holzberg D, Soyka M, Schreiber S, Matsuda F, Lathrop M, Schumann G,Albrecht U (2005). <strong>The</strong> clock gene Per2 influences the glutamatergic system and modulatesalcohol consumption. Nat Med. 11, 35-42.Hiller M, Huse K, Szafranski K, Jahn N, Hampe J, Schreiber S, Backofen R, Platzer M (2004)Widespread occurrence of alternative splicing at NAGNAG acceptors contributes toproteome plasticity. Nat Genet. 36, 1255-7.Wittlieb J, Khalturin K, Lohmann J, Anton-Erxleben F, Bosch TCG (2006) Transgenic Hydra allowin vivo tracking of individual stem cells during morphogenesis. Proc. Natl. Acad. Sci. USA, inpress.104
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Contents1 General Information about
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1 General Information about the Clu
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1.2 Research Program1.2.1 Summary/Z
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1.2.2.2 ObjectivesThe Future Ocean
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will address the emerging new resea
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Topics Objectives DisciplinesA1 Exa
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development of these new initiative
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Project Objective IndustryPartnersO
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Continued excellence in the field o
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The establishment of several new po
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1.4.1 Integrated School of Ocean Sc
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ensure that emerging innovations wi
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organisms to elevated CO 2 and decr
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ist wahrscheinlich stärker als wä
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enthic biota of gas release or the
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werden kann. Allerdings sind die ch
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DEKLIMGerman Climate Research Progr
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ITQ’sISAISOSJRGKCMSKitzLALIFLIMSL
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WTOWTSHXAFSXRDZMBWorld Trade Organi
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Prof. Dr. Boris Culik • Maritimes
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GMT-Geschäf*sstelleWe"*w{eltJ"*n $
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f,rylheonRaytheon Anschütz GmbHPos