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116 Cell-Penetrating Peptides: Processes and Applications<br />

along with plasmid transfection used to introduce DNA fragments into cells, 6,7 also<br />

require complex sample manipulation, experienced technical staff, and purchase of<br />

single-purpose systems; the combination of these issues results in delivery techniques<br />

that are inaccessible to many research groups.<br />

To allow simplified noninvasive delivery of peptides, proteins and oligonucleotides<br />

into intact cells a new method termed the “Trojan horse” approach has been<br />

developed. For this, the biologically active cargo is associated with a peptide intrinsically<br />

capable of penetrating the cell membrane lipid bilayer, resulting in delivery<br />

of the cargo to the intracellular space without lethal disruption of the membrane.<br />

Several peptides have been identified that can freely translocate across cell membranes<br />

and reside within the cytoplasm and nucleus without compromising normal<br />

cellular function. The majority of translocating peptides routinely used today have<br />

undergone sequence modifications such as amino acid substitution and formation of<br />

chimeras to produce variants with increased translocation activity compared to the<br />

original native sequences.<br />

In the literature, there are two major classes of translocating peptides. The first<br />

category is highly cationic with arginine- or lysine-rich sequences. They include<br />

HIV-1 Tat peptide, 8 penetratin, 9 the chimeric transportan, 10 and heat shock protein<br />

Hsp70. 11 The second category is hydrophobic and based on protein signal<br />

sequences. 12 These peptides differ in size, composition, and, possibly, mechanism<br />

of entry; yet all exhibit translocation activity. The herpes simplex virus type 1 VP22<br />

protein has also been reported to possess translocation activity that is not dependent<br />

on classical endocytosis or energy. 13 However, Lundberg and Johansson recently<br />

reported findings that suggest that the observed uptake is a product of artificial import<br />

and nuclear localization of VP22 during fixation. 14 O’Hare and Elliott agreed that<br />

some uptake during fixation does occur, but that this is a weak effect and insufficient<br />

to account for total transport activity. 15<br />

This chapter focuses on the identification and use of hydrophobic signal<br />

sequence-based peptides as translocation peptides; detailed descriptions of the<br />

remaining peptides may be found in other chapters of this handbook. Several aspects<br />

critical to the design of effective translocation peptides are also addressed, including<br />

the use of ligation strategies for coupling translocation peptides to cargoes and the<br />

identification of a potentially new class of translocation peptides.<br />

6.2 SIGNAL HYPOTHESIS<br />

Membrane translocating sequence (MTS) peptides are predominantly hydrophobic<br />

in character and therefore unlike the majority of translocating peptides also described<br />

in this book. These peptides are derived from secretory proteins that translocate<br />

through cellular membranes following synthesis and post-translational modifications.<br />

More than 20 years ago, Blobel and co-workers succinctly reported on the<br />

presence of a signal sequence and on the reliance of protein translocation on the<br />

interaction of this signal sequence with the membrane directly or the translocation<br />

machinery. 16-18<br />

Our understanding of the process by which a protein achieves its topological<br />

distribution within a cell or within a membrane has been shaped by Blobel’s work.

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