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218 Cell-Penetrating Peptides: Processes and Applications<br />

E<br />

(top)<br />

(bottom)<br />

FIGURE 9.10 (continued)<br />

pAntp (inner leaflet charge: -0.04)<br />

Total Restraints (kJ/mol Å 2 )<br />

Mass Center Penetration (A)<br />

leaflet, penetratin, the second helix, of the Antennapedia homeodomain, its first<br />

helix, and the entire homeodomain are predicted to penetrate, at least partially, in<br />

the membrane. Therefore, we suggest that the charge gradient within biological<br />

membranes would constitute an important factor for driving translocation of penetratins<br />

and homeodomains through biological membranes.<br />

These results are not contradictory with, but rather complete, models built up<br />

according to previously published experimental data. 17,68,69 These models suggested<br />

formation of inverted micelle with negatively charged phospholipids during the<br />

crossing of biological membranes. Indeed the presence of PL – , may constitute the<br />

first step enabling penetratin to interact with the membrane, to be followed by<br />

formation of inverted micelles. This new computer-based method should be very<br />

useful for screening and designing new peptide derivatives with cell-permeant potential.<br />

Angle(°)

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