SNOMED CT® Release Format 1 (RF1) Guide - ihtsdo

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324 | SNOMED CT Release Format 1 (RF1) Guide July 2012 Field Name SubsetType LanguageCode RealmID ContextID Value Navigation Table 251: Subset Members Table Example SubsetId 309902039 309902039 309902039 309902039 309902039 MemberID 309902002 309902002 362956003 362956003 362956003 4.4.2.5.2. Displaying a navigation subset MemberStatus 0 1 0 1 2 LinkedID 55342001 362956003 387713003 108290001 6996004 Displaying a navigation subset is very similar to using (4.4.2.2) | Is a | relationships for hierarchy navigation. Having mastered the techniques for using the | is a | relationship, the key to using Navigational Hierarchies lies in seeing which columns of the Subset Members table correspond to similar columns in the Relationship table. This is illustrated in Table 252. Table 252: Hierarchy Representation in Relationships and Navigation Subsets Usage Identify the hierarchy Identify the parent concept Identify the child concept Specify order of child under the parent Relationship Field RelationshipType ConceptId2 ConceptId1 (not applicable) Navigation SubsetMember Field SubsetId MemberId LinkedId MemberStatus The example subset members shown in Table 254 arrange the concepts listed in Table 2 into the navigation hierarchy shown in. Figure 50. © 2002-2012 International Health Terminology Standards Development Organisation CVR #: 30363434
Table 253: Concepts used in the Example Navigation Subset Set Id 1225002 1597004 168594001 168619004 168620005 168623007 168637003 168655007 168663008 168664002 168665001 168669007 205115004 241063007 241066004 241069006 241071006 241073009 241075002 241076001 241077005 241078000 Preferred Term | radiography of humerus | | skeletal X-ray of ankle and foot | | clavicle X-ray | | plain X-ray head of humerus | | plain X-ray shaft of humerus | | X-ray shaft of radius/ulna | | plain X-ray radius | | instability views carpus | | plain X-ray head of femur | | femoral neck X-ray | | plain X-ray shaft of femur | | patella X-ray | | radiologic examination of femur, anteroposterior and lateral views | | bicipital groove X-ray | | ulna groove X-ray | | ulna X-ray | | scaphoid X-ray | | metacarpal X-ray | | femur X-ray | | tibia and/or fibula X-ray | | tibia X-ray | | fibula X-ray | Terminology services Guide (RF1) | 325 © 2002-2012 International Health Terminology Standards Development Organisation CVR #: 30363434
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SNOMED CT ® Release Format 1 (RF1)
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Contents | 3 Release Format 1 - Det
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Chapter 1 Preface The purpose of th
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Table 3: Document Types Type Name a
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IHTSDO Glossary (DRAFT) • On line
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Chapter 2 Structure and Content Gui
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Figure 1: Multiple levels of granul
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Table 5: Example: Defining arthriti
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The full definitions of the concept
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Other components (i.e. Relationship
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2.1.2.2.1.3. Linking related Concep
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• Local content requirements that
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Consistent representation is a prer
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Figure 8: Abstract logical model of
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1. As originally stated: : • | Ha
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2.2.1.3.2.3.1. Supertype aspects of
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Figure 11: Example hierarchy with l
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Concept E F G H J K L M Note: Compr
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Concept M List of proximal primitiv
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Table 11: Non-redundant attribute v
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G. | Severe upper limb laceration |
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As a result of this limitation some
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2.2.1.4.3. Historical relationships
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2.2.2.1.1.2. Refinement attribute n
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2.2.2.1.4.3. Use of "unapproved att
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Interim recommendations 1. Wherever
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2.2.2.3.1. Close-to-user expression
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It is important to note that combin
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2.2.2.3.6.1. Example of equivalent
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Figure 25: Alternative expressions
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Figure 27: Possible expressions of
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Figure 28: SCTID Short Format - App
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PartitionId 05 Description A Cross
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SctId 999999990989121104 2.3.2.9. T
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2.3.3.2. Specification for Namespac
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2.3.3.3.1.4. Procedures 2.3.3.3.1.4
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1. Every Concept in an Extension:
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Table 17: Processing Transfers betw
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In May 2008, the HL7 Version 3 Stan
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An expression supports combinations
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digitNonZero= %x31-39 The first cha
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excision of left fallopian tube. No
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This existential restriction is lab
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• In order to generate the OWL ve
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• Though there are many candidate
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2.3.7.2.2.1. Single byte encoding C
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9 0 9 Table 29: The full array for
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else {document.getElementById("out"
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http://www.augustana.ab.ca/~mohrj/a
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version. It seems unwise to prevent
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Table DescDualKey Table ConcDualKey
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The IHTSDO recognizes that, while i
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3.2.2. Release Format 1 - Structure
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3.2.3.2. Core Tables Data - Structu
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Data Fields InitialCapitalStatus De
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3.2.4.1. Subset Mechanism - Structu
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Data Fields ContextId 3.2.4.2.2. Su
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Subset SNOMED CT Top Level Navigati
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• as a combination of codes; •
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Table 41: Cross Mapping Tables Cros
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Table 44: Cross Map Targets Table K
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The History Mechanism is also used
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In addition, the ReferencedId field
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Table Descriptions Descriptions Rel
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Table 49: Relationships depending o
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Table 51: Changes to Relationships
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Table 52: Changes to Relationships
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• The only Relationships that it
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ComponentId ConceptId ReleaseVersio
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A readme.txt file is distributed wi
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Value 6 10 11 Limited Moved elsewhe
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As new concepts are added to SNOMED
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Table 73: DescriptionStatus Values
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3.2.9.2.2.4. InitialCapitalStatus T
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3.2.9.3. relationships tables Each
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3.2.9.3.2.3. ConceptId2 Table 84: -
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An integer value that expresses an
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3.2.9.4.1.2.4. SubsetType Table 95:
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A string that identifies a Context
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3.2.9.4.2.1.2. Data Fields Table 10
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• MemberStatus 3.2.9.4.2.3.1.1. S
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3.2.9.4.2.4.1.3. MemberStatus Table
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3.2.9.4.2.5.2. Data Fields Table 11
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3.2.9.4.2.7.1.1. SubsetId Table 124
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3.2.9.4.2.8.1.3. MemberStatus Table
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3.2.9.4.3. Subset Definition File P
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3.2.9.5.1.2.3. MapSetSchemeId Table
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This discussion of rules is include
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3.2.9.5.1.3.2.3. MapRule Table 151:
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3.2.9.5.1.4.2.3. TargetRule Table 1
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RELAT_NMS = column in the LOINC tab
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The value of the SNOMED CT / LOINC
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The SNOMED CT Relationships Table e
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LOINC Analyte Name(s) DESMETHYLAMIO
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LOINC Analyte Name(s) COMPLEMENT IC
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The information provided includes d
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3.2.9.6.4.1.2. ReleaseVersion Table
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Value 6 7 8 9 10 11 Note: Name Limi
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3.2.9.6.5.1.1. ComponentId Table 17
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Release Format 1 is represents a sn
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RF1 Descriptions Table Descriptions
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Table 177: Concepts Table Use of re
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Use of recommended additional indic
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Use of recommended additional indic
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Table 184: Cross Map Sets Table Use
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Keys Partition Size Type Field Name
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Table 192: Word Equivalents Table U
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3.2.10. The Stated relationships ta
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Figure 41: Overview of Cross Map Sc
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Table 197: Cross Maps Sets Table Ma
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Table 201: Cross Maps Sets Table Ma
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Table 205: Cross Map Sets Table Map
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If this approach is followed, there
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This approach allows a more consist
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1. A record may contain many record
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• Temporally related to the selec
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CONCEPTID 95333004 7119001 95336007
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CONCEPTID 109778006 109788007 15270
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CONCEPTID 417163006 417746004 12820
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CONCEPTID 102706005 1677001 9145400
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CONCEPTID 399023006 399154007 39905
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CONCEPTID 399306005 399239005 39937
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CONCEPTID 125086000 78678003 388393
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CONCEPTID 339008 47002008 128419007
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CONCEPTID 16817006 15367004 1580700
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CONCEPTID 14509009 39250009 8627300
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CONCEPTID 122868007 122465003 78817
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CONCEPTID 19207007 74923002 6639100
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CONCEPTID 54305003 84100007 3216600
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CONCEPTID 255496004 255499006 24646
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CONCEPTID 62834003 5668004 34810001
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CONCEPTID 53224005 4150005 74636004
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CONCEPTID 47538007 19359003 3011000
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3.2.13. Enumerated values Value 0 1
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Table and Field Subsets SubsetType
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3.3. Release Format 2 Update Guide
Page 273 and 274: • The Release Format should minim
Page 275 and 276: 3.3.3.4. Backward compatibility The
Page 277 and 278: 3.3.4.5. Field Ordering Records in
Page 279 and 280: externalised structures such as Ref
Page 281 and 282: ContextId If either the RealmId fie
Page 283 and 284: eplaced by more descriptive ones if
Page 285 and 286: descriptions associated with concep
Page 287 and 288: Figure 45: Illustration of module d
Page 289 and 290: was inactivated. Each Reference ind
Page 291 and 292: Finally, add members to the Referen
Page 293 and 294: 3.4.1. File Naming Convention - Ove
Page 295 and 296: • Test/Beta Release File("xsct",
Page 297 and 298: In certain cases, an RF1 data file
Page 299 and 300: VersionDate refers to the official,
Page 301 and 302: Example: Excluding the Fully Specif
Page 303 and 304: 4.2.1.3. Pre-processing of distribu
Page 305 and 306: • Reject, highlight or apply othe
Page 307 and 308: Table 236: Essential concept Identi
Page 309 and 310: The purpose of this section of the
Page 311 and 312: Table 240: Example results for a Se
Page 313 and 314: • For each dual key, add rows to
Page 315 and 316: • Description104951019 is elimina
Page 317 and 318: 4.4.1.4.1. Avoiding multiple hits o
Page 319 and 320: Table 248: Relationship Example Con
Page 321 and 322: • Since the depth of the hierarch
Page 323: 4.4.2.5. Using navigation Subsets t
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Page 329 and 330: • 302402006 | radius and/or ulna
Page 331 and 332: Now we have tree nodes and their ch
Page 333 and 334: Subsets may be used to derive table
Page 335 and 336: • One Subset can be used as the b
Page 337 and 338: • A Context Concept Subset only r
Page 339 and 340: • A Navigation Subset specifies a
Page 341 and 342: • A RealmID identifies the specia
Page 343 and 344: 4.5. Testing and traversing subtype
Page 345 and 346: This approach removes the need for
Page 347 and 348: 4.5.5.2.4. Using the transitive clo
Page 349 and 350: Figure 55: Terminology server provi
Page 351 and 352: A field in the Component History Ta
Page 353 and 354: Cross maps table A data table consi
Page 355 and 356: • References Table Inactive compo
Page 357 and 358: A field in the Cross Maps Table tha
Page 359 and 360: A Subset that specifies sets of Nav
Page 361 and 362: A field in the Concepts Table that
Page 363 and 364: TargetId A SNOMED CT Identifier tha
Page 365: WordText A field in the Word Equiva
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