The Development of Novel Antibiotics Using ... - Jacobs University
The Development of Novel Antibiotics Using ... - Jacobs University
The Development of Novel Antibiotics Using ... - Jacobs University
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Table 1. High resolution ESI-TOF MS data in the positive ion mode for the products <strong>of</strong> carbohydrazide exchange<br />
reactions, products appeared as (M+H + , path a) and (M+Na + , path b) ions<br />
Entry Measured m/z Molecular Formula <strong>The</strong>oretical m/z Error<br />
[ppm]<br />
5 a,b 761.2334 a [M+H] + C 38 H 32 N 8 O 10 761.2314 a ˗2.6<br />
783.2159 b [M+Na] + 783.2134 b ˗3.2<br />
6 a,b 911.3277 a [M+H] + C 50 H 42 N 10 O 8 911.3260 a ˗1.9<br />
933.3104 b [M+Na] + 933.3079 b ˗2.6<br />
7 a,b 897.3522 a [M+H] + C 48 H 48 N 8 O 10 897.3566 a 4.9<br />
919.3364 b [M+Na] + 919.3386 b 2.3<br />
8 a,b 829.2949 a [M+H] + C 43 H 40 N 8 O 10 829.2940 a ˗1.1<br />
851.2767 b [M+Na] + 851.2760 b ˗0.9<br />
9 a,b 836.2812 a [M+H] + C 44 H 37 N 9 O 9 836.2787 a ˗3.0<br />
858.2633 b [M+Na] + 858.2606 b ˗3.1<br />
10 a,b 904.3423 a [M+H] + C 49 H 45 N 9 O 9 904.3413 a ˗1.1<br />
926.3198 b [M+Na] + 926.3232 b 3.7<br />
11 a,b 972.4040 a [M+H] + C 54 H 53 N 9 O 9 972.4039 a ˗0.1<br />
994.3830 b [M+Na] + 994.3858 b 2.8<br />
12 a,b 979.3886 a [M+H] + C 55 H 50 N 10 O 8 979.3886 a 0.0<br />
1001.3740 b [M+Na] + 1001.3705 b ˗3.5<br />
a Refluxing macrocycles 5-7, spectrum recorded after 8 days in the positive ion mode. b Refluxing building block<br />
precursors 1-4, spectrum recorded after 8 days in the positive ion mode.<br />
After 144 h <strong>of</strong> refluxing tetra-carbohydrazide cyclophanes 5-7 in a mixture <strong>of</strong> DMF/MeOH and<br />
in the presence <strong>of</strong> 5 µL <strong>of</strong> AcOH, the reaction did not reach the equilibrium point. Addition <strong>of</strong> an<br />
excess <strong>of</strong> AcOH (45 µL) was vital to facilitate the exchange process and to drive the reaction to<br />
equilibration. In the final equilibrium composition, the molecular ions <strong>of</strong> macrocycles 5 and 8-10<br />
possess high peak intensities in comparison with those corresponding to macrocycles 6, 7, 11 and<br />
12. <strong>The</strong> peak intensities for all macrocycles obtained via path (a) remain steady over the course<br />
<strong>of</strong> the reaction and did not change by prolonged refluxing. This suggested that equilibration point<br />
can be easily reached only after 48 h <strong>of</strong> refluxing via path (a). Interestingly, a total <strong>of</strong> 11<br />
different reaction intermediates were detected after 2 h <strong>of</strong> refluxing tetra-carbohydrazide<br />
cyclophane macrocycles 5-7 and their precursors 1-4.<br />
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