The Development of Novel Antibiotics Using ... - Jacobs University

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Intens. 1500 1564.6445 Host-Guest 1000 500 0 1565.6389 1566.6539 1567.6378 1568.6194 1570.5943 1571.6109 1572.6379 1573.6306 1566 1568 1570 1572 1574 m/z Intens. 500 400 300 1348.5243 Host-Guest 1349.5352 1350.5450 200 100 0 1351.5483 1348 1349 1350 1351 1352 1353 m/z Intens. 1250 1000 750 1489.6005 Host-Guest 1490.6017 500 1491.6007 250 0 1492.5953 1493.0380 1493.6106 1489.5 1490.0 1490.5 1491.0 1491.5 1492.0 1492.5 1493.0 1493.5 m/z Intens. 1250 1000 750 500 1423.5649 Host-Guest 1424.5728 1425.5714 250 1426.5873 1427.6039 1428.5859 0 1423 1424 1425 1426 1427 1428 1429 1430 m/z 3 | S
Intens. 2000 1493.6091 Host-Guest 1500 1000 1491.7540 1495.6037 500 1496.5942 1497.5960 1499.5655 0 1492 1494 1496 1498 1500 1502 1504 m/z Intens. 1500 Host-Guest 1418.5591 1000 1419.5590 500 1414.5746 1415.5569 1416.5804 1417.5596 0 1414 1415 1416 1417 1418 1419 m/z Intens. 1500 1352.5285 1353.5317 Host-Guest 1000 500 1354.5309 1355.5452 1356.5323 1357.4959 1359.5675 1360.5427 1361.7040 0 1352 1354 1356 1358 1360 1362 m/z Intens. 6000 1364.5635 Host-Guest 4000 2000 1370.5470 1372.5687 1376.5712 1378.5717 1382.5773 1384.5695 0 1365.0 1367.5 1370.0 1372.5 1375.0 1377.5 1380.0 1382.5 m/z 4 | S
Page 1 and 2:
The Development of Novel Antibiotic
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Declaration of Authorship I, Hany N
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Abstract Over the past few decades,
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Chapter 2 Trianglimine Chemistry
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Figure 2.4 Trianglimines 10-12 with
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Abbreviations ACN AcOH Ala Acetonit
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RMS ROESY SjGST TFA THF TLC TMS TOC
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Introduction complete remodel of th
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Introduction following protonation.
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Introduction Lehn and co-workers re
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Introduction Figure 1.8 Generation
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Introduction Figure 1.11 Synthetic
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Introduction Figure 1.13 Generation
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Introduction 1.3.11 Boronic ester e
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Introduction References 1. E. Mouli
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Introduction 51. B. Shi, M. F. Grea
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Introduction Figure 2.2 shows compu
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Introduction incorporate β-cyclode
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Introduction Trianglamine-Zn(R) 2 c
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Introduction 24. J. Gajewy, J. Gawr
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Scope of Work Scope of Work In this
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Scope of Work can be obtained from
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Scope of Work Figure 3.4 Structures
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Scope of Work References 1. G. Wrig
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Organic & Biomolecular Chemistry Ci
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Downloaded by Jacobs University Bre
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View Online Downloaded by Jacobs Un
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Paper 2 Rapid Commun. Mass Spectrom
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Trianglimine formation mechanism by
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Paper 3 Org. Biomol. Chem., 2012, 1
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View Online Table 2 Distances (Å)
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Paper 4 Chem. Eur. J., 2012, submit
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(4R,5R)- and (4S,5S)-dimethyl-2,2-d
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that two distinct conformational is
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the thimble was recharged with fres
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Paper 5 Rapid Commu. Mass Spectrom.
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INTRODUCTION No single class of dru
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EXPERIMENTAL All the solvents and r
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(b) Refluxing macrocycles 5, 6 and
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Scheme 1. Graphical representation
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Figure 1. A plot of relative intens
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In contrast, formation of library m
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Figure 5. Generated dynamic library
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macrocycle 32 from the dynamic libr
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The polar carbamate group participa
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[2] WHO World health report 2003. h
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[32] B. Lienard, N. Selevsek, N. Ol
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FULL PAPER Synthesis and ESI-MS Com
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ability of the technique to provide
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aimed at assessing molecular recogn
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Paper 7 manuscript Synthesis, self-
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2 Similar to the case of trianglimi
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4 Receptor 7 showed enhanced recogn
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6 The newly synthesized receptors s
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8 27. Nour, H. F.; Hourani, N.; Kuh
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120| P a g e Appendix
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Supplementary Information: Suppleme
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Supplementary Material (ESI) for Or
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Monitoring the [3+3]-cyclocondensat
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Monitoring the cyclocondensation re
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Product ions appeared as [M+H] + Fi
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Scheme 1. Assigned higher oligomers
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Supplementary Information: Synthesi
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Scheme 4. Proposed fragmentation me
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DMSO Figure 1. 1 H-NMR spectrum for
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Figure 6. 13 C-NMR spectrum for (4S
Page 169 and 170: Intens. 7 x10 1.5 200.7 1.0 0.5 0.0
Page 171 and 172: Intens. 7 x10 200.7 1.5 1.0 0.5 0.0
Page 173 and 174: Intens. 4 x10 577.2 2.0 1.5 1.0 451
Page 175 and 176: HN N O O R R NH O O N N HN R O O O
Page 177 and 178: Intens. 5 x10 727.2 2.0 1.5 1.0 O O
Page 179 and 180: Intens. 5 x10 697.1 1.5 1.0 728.2 0
Page 181 and 182: O O O O HN N O O NH N HN N O O NH N
Page 183 and 184: Figure 38. 1 H-NMR spectrum for mac
Page 185 and 186: Intens. 5000 276.8 4000 3000 2000 1
Page 187 and 188: Intens. 7 x10 599.1 1.5 1.0 0.5 0.0
Page 189 and 190: (a) HN N O O NH O O N (b) HN N O NH
Page 191 and 192: Scheme 11. Proposed fragmentation m
Page 195 and 196: Scheme 14. Proposed fragmentation m
Page 197 and 198: Intens. 4 x10 550.9 3 2 1 0 500 100
Page 199 and 200: Figure 68. 2D-ROESY spectrum for ma
Page 201 and 202: Supplementary Information: Novel sy
Page 203 and 204: Intens. 6 x10 0.8 0.6 0.4 240.9 459
Page 205 and 206: Figure 9. 1 H-NMR spectrum for macr
Page 209 and 210: Intens. 5 x10 1.5 968.1 1.0 0.5 813
Page 211 and 212: Intens. 5 x10 897.4 4 2 335.3 707.3
Page 213 and 214: Scheme 3. Suggested fragmentation m
Page 217 and 218: Molecular modelling data for the co
Page 219: Figure 1. 1 H NMR spectrum for dica
Page 223 and 224: Intens. [%] 100 775.3 80 388.1 60 4
Page 225 and 226: Intens. 600 N HN O O 467.1916 400 O
Page 227 and 228: Intens. 6000 5000 HN N O O O O NH N
Page 229 and 230: Table 1. High resolution ESI-TOF da
Page 231 and 232: i Figure 1. 1 H NMR spectrum for ma
Page 233 and 234: i Figure 5. 1 H NMR spectrum for ma
Page 235 and 236: i j Figure 9. 1 H NMR spectrum for
Page 237 and 238: i Figure 13. DEPT-135 spectrum for
Page 239 and 240: Scheme 1. General mechanism of frag
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Page 243 and 244: Intens. [%] 100 1131.3 80 60 40 20
Page 245 and 246: Intens. 1500 1528.6088 1000 500 150
Page 247 and 248: Intens. [%] 100 80 60 40 Free guest
Page 249 and 250: Intens. 4 x10 1085.3575 1.25 1.00 0
Page 251 and 252: Intens. [%] 100 80 Free guest 586.1
Page 253 and 254: Synthesis, self-assembly and ESI-MS
Page 255 and 256: O O HN NH HN O O NH HN O 11 O NH O
Page 257 and 258: O O HN NH HN O O NH HN O 9 O NH O O
Page 259 and 260: H 2 O DMSO DMSO Figure 6. 1 H-NMR a
Page 261 and 262: Intens. 5 x10 5 -MS 487.1588 4 3 2
Page 263 and 264: Intens. -MS 6 x10 0.8 0.6 0.4 0.2 1
Page 265 and 266: Intens. -MS 6 x10 O O 350.9 1.5 1.0
Page 267 and 268: Intens. [%] 100 -MS 486.9 Exact str
Page 269 and 270: Intens. [%] -MS 100 486.9 80 60 975
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Intens. [%] +MS 100 80 517.2 Exact
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Intens. [%] 100 80 60 +MS 388.1 775
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Intens. [%] 100 +MS 517.2 Exact str
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Intens. [%] 100 80 +MS 1031.4939 7
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Intens. [%] 100 +MS 517.2 Exact str
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Intens. [%] 100 -MS 2 586.1 80 60 4
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Intens. [%] 100 -MS 2 875.2 Exact s
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Table 1. High resolution ESI-TOF/MS
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274 | P a g e
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276 | P a g e
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4. H. Nour, A. López-Periago, N. K
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