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The Development of Novel Antibiotics Using ... - Jacobs University

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H. F. Nour, A. M. Lopez-Periago and N. Kuhnert<br />

(b) Mixing equimolar quantities <strong>of</strong> dialdehydes 19 and 33 with<br />

(1R,2R)-1,2-diaminocyclohexane 1 in DCM<br />

To a stirred solution <strong>of</strong> (1R,2R)-1,2-diaminocyclohexane 1<br />

(15.62 mg, 0.137 mmol) in DCM (182 mL) were added 3-<br />

phenoxybiphenyl-4,4′-dicarbaldehyde 19 (18.12 mg, 0.06 mmol)<br />

in DCM (182 mL) and ethyl 4-[4,4′-diformyl-(1,1′-biphenyl)-3-yl]-<br />

piperazine-1-carboxylate 33 (23.3 mg, 0.06 mmol) in DCM<br />

(182 mL). <strong>The</strong> mixture was stirred at room temperature for 46 h.<br />

Aliquots were taken at defined time intervals and a few drops<br />

<strong>of</strong> MeOH were added to the sample before it was infused into<br />

the ESI-TOF mass spectrometer.<br />

RESULTS AND DISCUSSION<br />

<strong>The</strong> formation <strong>of</strong> trianglimines constitutes a complex multistep<br />

reaction, in which six imine bonds are formed in a single<br />

one-pot reaction at relatively high concentrations <strong>of</strong> all reactants.<br />

Gawroński et al. reported that the reactions <strong>of</strong> (1R,2R)-<br />

1,2-diaminocyclohexane 1 with terephthaldehyde 2 and<br />

isophthaldehyde 3 resulted in clean formation <strong>of</strong> the corresponding<br />

trianglimines 4 and 5 after 2–3 h <strong>of</strong> stirring at room temperature<br />

(Fig. 1). [9] We decided to study the mechanism <strong>of</strong> this reaction<br />

in detail taking advantage <strong>of</strong> the capability <strong>of</strong> ESI-MS in the positive<br />

ion mode to potentially detect all possible reaction intermediates.<br />

<strong>The</strong> reactions were conducted between 1 and 2 or 3 at a<br />

concentration <strong>of</strong> 0.1 M in DCM at room temperature. For MS<br />

analysis, aliquots <strong>of</strong> the reaction mixture were taken at different<br />

time intervals, diluted to a concentration <strong>of</strong> 0.1 mM and directly<br />

infused into the ESI-TOF mass spectrometer.<br />

Cyclocondensation mechanism <strong>of</strong> trans-(1R,2R)-1,2-<br />

diaminocyclohexane with terephthaldehyde and<br />

isophthaldehyde<br />

By monitoring the reaction between (1R,2R)-1,2-diaminocyclohexane<br />

1 and dialdehyde 2 and 3 in real time with ESI-TOF<br />

MS, a total <strong>of</strong> eleven different reaction intermediates could be detected<br />

by the appearance <strong>of</strong> their protonated pseudomolecular<br />

ions and their structures were assigned based on their highresolution<br />

m/z values (Figs. 2 and 3). <strong>The</strong> reaction intermediates<br />

include a series <strong>of</strong> mono- topenta-imines 7–17 along with some<br />

long-chain higher polyimine oligomers (not shown in figures;<br />

for structures and ESI-TOF data, see Supplementary Information).<br />

In the course <strong>of</strong> the reaction the higher oligomers disappear<br />

at the expense <strong>of</strong> the final macrocyclization products.<br />

Interestingly, the relative intensity <strong>of</strong> the ions corresponding<br />

to the intermediates <strong>of</strong> the reaction with isophthaldehyde and<br />

terephthaldehyde are very different, suggesting that the<br />

mechanism <strong>of</strong> formation <strong>of</strong> the two geometrically distinct<br />

macrocycles is different. For terephthaldehyde 2 the intermediates<br />

with the two most intense signals correspond to monoimine<br />

7 and bis-imine 8 bearing two terminal amino moieties.<br />

In contrast, for isophthaldehyde 3 the bis-imine 14 with two<br />

Figure 2. ESI-TOF mass spectrum in the positive ion mode recorded after 10 min from<br />

the start <strong>of</strong> the reaction <strong>of</strong> (1R,2R)-1,2-diaminocyclohexane 1 with terephthaldehyde 2;<br />

the products were detected as [M+H] + ions.<br />

1072<br />

Figure 3. ESI-TOF mass spectrum in the positive ion mode recorded after 10 min from<br />

the start <strong>of</strong> the reaction <strong>of</strong> (1R,2R)-1,2-diaminocyclohexane 1 with isophthaldehyde 3;<br />

the products were detected as [M+H] + ions.<br />

wileyonlinelibrary.com/journal/rcm Copyright © 2012 John Wiley & Sons, Ltd. Rapid Commun. Mass Spectrom. 2012, 26, 1070–1080

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