12.07.2015 Views

Inaugural ASAS–CAAV Asia Pacif ic Rim Conference Abstracts

Inaugural ASAS–CAAV Asia Pacif ic Rim Conference Abstracts

Inaugural ASAS–CAAV Asia Pacif ic Rim Conference Abstracts

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102 Construction and analysis of a rumen fosmid metagenom<strong>ic</strong>library from Hu sheep. J. K. Wang, P. P. An*, and J. X. Liu, College of AnimalSciences, Zhejiang University, Hangzhou, Zhejiang, P. R. China.A fosmid metagenom<strong>ic</strong> library of uncultured m<strong>ic</strong>roorganisms from Hu sheeprumen was constructed to explore and tap the genet<strong>ic</strong> potential of the rumenecosystem. Rumen fluid was collected from 2 rumen-fistulated sheep fed adiet with 60% Chinese wildrye plus 40% concentrate mixture. The DNA wasextracted by the SDS-based DNA extraction method, and the crude DNAextracts were purified using the MiniBEST bacterial genom<strong>ic</strong> DNA extractionkit verseion 2.0. A fosmid library was constructed using the pCC2FOS vectorand EPI300-T1R competent Escher<strong>ic</strong>hia coli cells of the CopyControl FosmidLibrary Production kit (Ep<strong>ic</strong>entre Biotechnologies). In total, 12,704 cloneswere acquired. Restr<strong>ic</strong>tion analysis revealed a high level of diversity of thecloned DNA fragments with XhoI and BamHI. The insert size of the clonesranged from 17 to 55 kb, with an average insert size being 30.9 kb and themajority ranging from 36 to 40 kb and 26 to 30 kb. Therefore, the capacityof this fosmid library was 393 Mb. The fosmid library clones showed goodstability after cultivation for 100 generations, as analyzed by restr<strong>ic</strong>tion analysiswith Hind III. Xylanase activity was screened using xylan (0.1%) plates and theCongo red assay. Eighteen clones exhibited hydrolyt<strong>ic</strong> activity towards xylan.Key Words: fosmid metagenom<strong>ic</strong> library, Hu sheep, xylanase31

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