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10th Benelux Bioinformatics Conference <strong>bbc</strong> <strong>2015</strong><br />

List of abstracts<br />

K1 MEDICAL DATA AND TEXT MINING: LINKING DISEASES, DRUGS, AND ADVERSE REACTIONS 17<br />

K2<br />

Keynotes<br />

MULTIPLE SURVIVAL STRATEGIES TO DEAL WITH THE MULTIPLICATION OF MULTIPLE SEQUENCE<br />

ALIGNMENT METHODS<br />

18<br />

Corporate presentations<br />

C1 ILLUMINA SOFTWARE PLATFORMS TO TRANSFORM THE PATH TO KNOWLEDGE AND DISCOVERY 19<br />

C2<br />

THE SYSTEMS TOXICOLOGY COMPUTATIONAL CHALLENGE: IDENTIFICATION OF EXPOSURE<br />

RESPONSE MARKERS<br />

20<br />

Selected oral presentations<br />

O1 CELL TYPE-SELECTIVE DISEASE ASSOCIATION OF GENES UNDER HIGH REGULATORY LOAD 21<br />

O2 PREDICTING OLIGOGENIC EFFECTS USING DIGENIC DISEASE DATA 22<br />

O3<br />

O4<br />

A COMPREHENSIVE COMPARISON OF MODULE DETECTION METHODS FOR GENE EXPRESSION<br />

DATA<br />

LATEBICLUSTERING: EFFICIENT DISCOVERY OF TEMPORAL LOCAL PATTERNS WITH POTENTIAL<br />

DELAYS<br />

O5 INFERRING DEVELOPMENTAL CHRONOLOGIES FROM SINGLE CELL RNA 25<br />

O6<br />

O7<br />

COMBINING TREE-BASED AND DYNAMICAL SYSTEMS FOR THE INFERENCE OF GENE<br />

REGULATORY NETWORKS<br />

MODELING THE REGULATION OF Β-CATENIN SIGNALLING BY WNT STIMULATION AND GSK3<br />

INHIBITION<br />

O8 RANKED TILING BASED APPROACH TO DISCOVERING PATIENT SUBTYPES 28<br />

O9<br />

O10<br />

DEVELOPMENT OF A DNA METHYLATION-BASED SCORE REFLECTING TUMOUR INFILTRATING<br />

LYMPHOCYTES<br />

PREDICTION OF CELL RESPONSES TO SURFACE TOPOGRAPHIES USING MACHINE LEARNING<br />

TECHNIQUES<br />

O11 ANALYSIS OF MASS SPECTROMETRY QUALITY CONTROL METRICS 31<br />

O12 XILMASS: A CROSS-LINKED PEPTIDE IDENTIFICATION ALGORITHM 32<br />

O13<br />

O14<br />

AUTOMATED ANATOMICAL INTERPRETATION OF DIFFERENCES BETWEEN IMAGING MASS<br />

SPECTROMETRY EXPERIMENTS<br />

ENHANCEMENT OF IMAGING MASS SPECTROMETRY DATA THROUGH REMOVAL OF SPARSE<br />

INTENSITY VARIATIONS<br />

O15 DETERMINANTS OF COMMUNITY STRUCTURE IN THE PLANKTON INTERACTOME 35<br />

O16<br />

O17<br />

BIOINFORMATICS TOOLS FOR ACCURATE ANALYSIS OF AMPLICON SEQUENCING DATA FOR<br />

BIODIVERSITY ANALYSIS<br />

GENE CO-EXPRESSION ANALYSIS IDENTIFIES BRAIN REGIONS AND CELL TYPES INVOLVED IN<br />

MIGRAINE PATHOPHYSIOLOGY: A GWAS-BASED STUDY USING THE ALLEN HUMAN BRAIN ATLAS<br />

13<br />

23<br />

24<br />

26<br />

27<br />

29<br />

30<br />

33<br />

34<br />

36<br />

37

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