Ã©cologie des virus influenza aviaires en Camargue - IRD

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Chapitre IIFigure 3: Impact of transmission route removal in the model which involves densitydependentand waterborne transmission. Removal of waterborne transmission ( ω =0) leadsto a lower disease prevalence with a peak in May. Removal of densitydependenttransmission ( β =0) leads to a higher disease persistence than with densitydependenttransmission only. Waterborne transmission in isolation leads to similar dynamic, but lessamplified, as those observed for the model involving both transmission routes (waterborne +density dependent transmission).82
Influenza aviaires en CamargueOnline appendixDisease dataWe collected and tested 2 389 fecal samples from 89 freeliving avian species belonging to12 orders. Birds were trapped from September 2005 to July 2006. The presence of avianinfluenza viruses (AIV) was detected by reverse transcription polymerase chain reactionamplification (RTPCR) targeting the conserved matrix gene segment (Lebarbenchon et al.,2007a,b). Twentysix samples were positive for AIV (i.e. detection of virus in feces), butnone were found positive for a highly pathogenic (HP) AIV virus. Details concerningsamples collection and molecular analysis were previously published by Lebarbenchon et al.(2007a,b). Figure S1 represents the AIV prevalence in wild birds used in this study.Population dynamics of the whole avian communityOrnithological data (Jourdain et al. 2007, Figure S2) provide the minimal population size foreach species for each month. These population sizes were added up to quantify thepopulation dynamics of the whole community. Within our framework, we assumed that therecorded abundance was reached at the end of the month.We assumed that population fluctuations were only due to birth or death. In fact, thedynamic system is not change either if bird leave the community by migration or by death.However, this assumption may introduce some confusion concerning the entry process. If abird is introduced in the community by migration, as Infectious or Recovered, rather than bybirth, i.e. as Susceptible, this could influence the dynamics of the whole community.83
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UNIVERSITÉ MONTPELLIER IISCIENCES
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RemerciementsCette thèse est le fr
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RemerciementsJe remercie JeanPaul
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SommaireIntroduction. 11. Zoonoses
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Liste des annexesAnnexe 1 (p. 161):
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IntroductionIntroduction.En 2008, p
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IntroductionDe nombreux facteurs fa
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Introductionpourquoi le parasite es
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Introduction4. Objectifs et questio
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CHAPITRE I:ACTIVITÉS HUMAINES, PAR
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Chapitre I1. Activités humaines et
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Chapitre I12
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Chapitre IIIreported, in Bewick's s
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Chapitre IIIunder the artificial co
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Chapitre IIIfor Research and Techno
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Chapitre III44. SturmRamirez KM,
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Chapitre IIIlocally and at a distan
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Chapitre III144
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Discussion générale et perspectiv
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Références bibliographiquesRéfé
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Références bibliographiquesFouchi
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Références bibliographiquesKilbou
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Références bibliographiquesScott
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ANNEXES
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Annexe 1162
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Annexe 1180
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Annexe 1182
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Annexe 1184
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Annexe 1186
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Annexe 1188
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Annexe 1190
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Annexe 2192
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Annexe 2Ecology of ecosystems and p
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Annexe 2Apparent competitionWith fe
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Annexe 2rates decrease significantl
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Annexe 2(e.g. light, humidity, temp
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Annexe 2between species, types of p
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Annexe 28 Sukhdeo, M.V.K. and Herna
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Annexe 2diversity. Trends Ecol. Evo
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Annexe 267 Park, T. (1948) Experime
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Annexe 2BOX1: Parasitemediated ap
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Annexe 2(a)(b)Box 2, figure I:panel
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Annexe 2Mature worms manipulate cri
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Annexe 2216
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Annexe 3218
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Annexe 3220
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Espèces échantillonnées, effecti
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Ã©cologie des virus influenza aviaires en Camargue - IRD

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