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AMINO ACID SOURCES 175<br />

from T. rangeli and C. fasciculata retain the<br />

C-terminal extension in the mature enzyme,<br />

and thus have a molecular weight appreciably<br />

higher than those of the papain-like<br />

cysteine proteinases. The longest C-terminal<br />

extension described so far, that of cruzipain<br />

(130 amino acids) undergoes a number of<br />

post-<strong>trans</strong>lational modifications, including<br />

N-glycosylation. Cruzipain and congopain<br />

are strongly antigenic. In the case of cruzipain,<br />

the C-terminal extension is responsible for<br />

antigenicity.<br />

A truncated recombinant form of cruzipain<br />

(cruzainc), lacking the C-terminal domain, has<br />

been crystallized and its three-dimensional<br />

structure, complexed with several synthetic<br />

peptidic inhibitors, has been determined. The<br />

single polypeptide chain of 215 amino acids<br />

folds into two distinct domains which define<br />

the active site cleft, as well as seven substratebinding<br />

subsites, a structure similar to that<br />

found in other members of the C1 family. The<br />

active site cleft contains the catalytic triad,<br />

formed by Cys25 and His159, which form a<br />

thiolate–imidazolium ion pair essential for the<br />

enzymatic activity, and Asn175. The major<br />

structural differences between cruzipain and<br />

papain are found in the regions of the loops and<br />

turns. Processing of the pro-enzymes to their<br />

mature forms may be due to self-activation,<br />

but at least in the case of the CPb enzymes<br />

from L. mexicana, it appears that CPa can<br />

process the CPbs. The CPb enzymes are specific<br />

to the amastigote stage, and their expression<br />

is induced in promastigotes when the pH<br />

drops to about 4, accompanying differentiation<br />

to the amastigote stage.<br />

Type II and Type III cysteine proteinases<br />

detected in Leishmania (CPa and CPc) are<br />

encoded by single copy genes (lmcpa and<br />

lmcpc), and lack gelatinolytic activity. Mature<br />

CPa has a characteristic three-amino acid<br />

insertion close to the N-terminus, and a very<br />

short C-terminal extension. CPc completely<br />

lacks a C-terminal extension, is amphiphilic<br />

and possibly associated with membranes.<br />

Trypanosomatid Type I and II cysteine proteinases<br />

are lysosomal enzymes, and recently<br />

a role for the pro-domain in their targeting to<br />

the lysosome has been proposed. At least in<br />

the case of L. mexicana, trafficking to the lysosomes<br />

seems to occur via the flagellar pocket.<br />

In addition to the lysosomal forms, which<br />

certainly account for most of the activity,<br />

membrane-associated forms of Type I and<br />

Type III enzymes also appear to be present.<br />

P. falciparum and other malarial parasites<br />

contain a complex array of proteolytic enzymes,<br />

representing all catalytic classes. Plasmodial<br />

proteinases are thought to be involved in red<br />

blood cell invasion and rupture, and are responsible<br />

for the digestion of hemoglobin inside the<br />

food vacuole. Several cysteine proteinases have<br />

been described in P. falciparum and other<br />

Plasmodium species, specifically falcipains<br />

1 and 2. Falcipain 1 is a cathepsin L-like enzyme.<br />

The gene sequence predicts a 67 kDa protein<br />

which contains a signal peptide and a large proenzyme<br />

domain, about 280 amino acids long,<br />

and thus larger than the mature cysteine proteinase,<br />

which has an apparent M r of 26.8 kDa.<br />

Falcipain 2 is the major cysteine proteinase in<br />

the trophozoite.<br />

E. histolytica secretes a number of cysteine<br />

proteinases into the medium. Those best characterized<br />

have apparent molecular masses of<br />

22–27 kDa (amoebapain), 26–29 kDa (histolysain),<br />

16 kDa (cathepsin B) and 56 kDa (neutral<br />

cysteine proteinase). At least seven genes<br />

encoding enzymes from this class have been<br />

identifed from E. histolytica; Eh-CPp1 encodes<br />

amoebapain whereas Eh-CPp2 encodes histolysain.<br />

The mature proteins are 86.5% identical<br />

and are cathepsin B-like. As in most<br />

other parasitic protozoa, these enzymes are<br />

found in organelles similar to lysosomes,<br />

BIOCHEMISTRY AND CELL BIOLOGY: PROTOZOA

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