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an epidemiological study of listeriosis in dairy cattle

an epidemiological study of listeriosis in dairy cattle

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UK), 0.5μM DNA primer, 1 unit Supertaq DNA polymerase (Stratech Scientific,<br />

Cambridge, UK) <strong>an</strong>d 10μl <strong>of</strong> cell supernat<strong>an</strong>t (f<strong>in</strong>al volume 50μl). S<strong>in</strong>gle primer<br />

(Cruachem Ltd., Glasgow UK), at concentration <strong>of</strong> 25μM, was added to each reaction<br />

mixture which was then overlaid with 3-4 drops <strong>of</strong> liquid paraff<strong>in</strong>. The mixture was<br />

then placed <strong>in</strong> a PCR Thermal Reactor (Hybaid, Middlesex, UK) with temperature<br />

programm<strong>in</strong>g as follows;<br />

-one cycle at 94 0 C for 3 m<strong>in</strong>utes to denature template DNA,<br />

-four low str<strong>in</strong>gency cycles at 94 0 C for 45 seconds, 26 0 C for 2 m<strong>in</strong>utes, <strong>an</strong>d 72 0 C for 2<br />

m<strong>in</strong>utes with ramp sett<strong>in</strong>g <strong>of</strong> 2, to <strong>an</strong>neal template DNA <strong>an</strong>d primer,<br />

-thirty cycles at 94 0 C for 45 seconds, 36 0 C for 1 m<strong>in</strong>ute, 72 0 C for 2m<strong>in</strong>utes with ramp<br />

default sett<strong>in</strong>g,<br />

-f<strong>in</strong>ally one cycle at 72 0 C for 5 m<strong>in</strong>utes to extend the reaction with Taq polymerase.<br />

(vi) Test repeatability:<br />

The repeatability <strong>of</strong> the test was evaluated by us<strong>in</strong>g 2 isolates <strong>of</strong> L.<br />

monocytogenes <strong>an</strong>d 1 isolate <strong>of</strong> L. <strong>in</strong>nocua <strong>in</strong> the test on two occasion us<strong>in</strong>g the same<br />

procedure.<br />

(vii) Analysis <strong>of</strong> PCR product:<br />

The PCR products were <strong>an</strong>alysed by electrophoresis <strong>in</strong> 1% w/v agarose with<br />

TBE buffer (0.089M Tris base, 0.089M orthoboric acid, 0.002M EDTA, pH8.0). 2μl <strong>of</strong><br />

load<strong>in</strong>g buffer (conta<strong>in</strong><strong>in</strong>g bromophenol blue 0.25% w/v <strong>an</strong>d sucrose 40% w/v <strong>in</strong><br />

distilled water) was added to 10μl <strong>of</strong> f<strong>in</strong>al PCR product <strong>an</strong>d mixed well. 10μl <strong>of</strong> this<br />

mixture was loaded onto the gel <strong>an</strong>d run at 100-115 volts for about 2-3 hours. The gel<br />

was then soaked <strong>in</strong> ethidium bromide (0.5mg/L) for about 30 m<strong>in</strong>utes the b<strong>an</strong>ds<br />

169

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