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Regulation <strong>of</strong> Nuclear<br />
Transport Processes<br />
Structure <strong>of</strong> <strong>the</strong> Group<br />
Group Leader<br />
Katrin Stade<br />
Graduate and Undergraduate Students<br />
Anja Neuber<br />
Katrin Stade<br />
(Helmholtz Fellow)<br />
The transport <strong>of</strong> macromolecules between <strong>the</strong> nucleus and cytoplasm is a major cellular activity with respect to<br />
both, <strong>the</strong> number <strong>of</strong> particles involved and energy consumption. Complex processes such as signal transduction<br />
and cell cycle progression which also rely on nuclear transport reactions are tightly regulated at this level to occur<br />
efficiently and in a coordinated fashion. Not unexpectedly, mutations in components <strong>of</strong> <strong>the</strong> nuclear transport<br />
machinery result in deregulation <strong>of</strong> <strong>the</strong>se processes and may ultimately lead to <strong>the</strong> development <strong>of</strong> severe human<br />
disease as for example cancer, primary billiary cirrhosis and triple A syndrome.<br />
Post-translational modifications such as phosphorylation are well known to control nuclear transport processes.<br />
More recently, a ra<strong>the</strong>r novel protein modification system has been proposed to play a role in nucleocytoplasmic<br />
trafficking. The ubiquitin-like small modifier SUMO which previously had been shown to play an important role in<br />
transcriptional repression, chromosome segregation and DNA repair was also recognized as a key player for one particular<br />
nuclear protein import pathway.<br />
By <strong>the</strong> use <strong>of</strong> a genetic screen in <strong>the</strong> buddding yeast<br />
Saccharomyces cerevisiae, we have recently identified several<br />
novel factors involved in nuclear transport reactions and<br />
gene silencing. Using in vivo experiments as well as in vitro<br />
assays, we are currently studying <strong>the</strong>se genes in more detail<br />
and wish to elucidate <strong>the</strong> functional implications <strong>of</strong> SUMO<br />
modification for <strong>the</strong> corresponding proteins.<br />
Ano<strong>the</strong>r research interest <strong>of</strong> <strong>the</strong> lab is <strong>the</strong> karyopherin<br />
Crm1/Xpo1 which in virally infected eukaryotic cells is<br />
responsible for <strong>the</strong> nuclear export <strong>of</strong> <strong>the</strong> HIV pre-messenger<br />
RNA particle. The budding yeast orthologue Xpo1 was found<br />
to export reporter proteins containing a nuclear export signal<br />
and several classes <strong>of</strong> cellular RNA. Since <strong>the</strong>n Xpo1 has<br />
been characterized in greater detail, but many questions<br />
still remain unsolved: what are <strong>the</strong> major cellular export<br />
substrates for this exportin and how are <strong>the</strong>y transported to<br />
<strong>the</strong> cytoplasm? Does Xpo1 like o<strong>the</strong>r components <strong>of</strong> <strong>the</strong><br />
nuclear transport machinery play an additional role in chromosome<br />
segregation during mitosis and how is this<br />
achieved? We are currently addressing <strong>the</strong>se questions by<br />
<strong>the</strong> use <strong>of</strong> genetic strategies as well as biochemical methods<br />
in <strong>the</strong> budding yeast Saccharomyces cerevisae.<br />
Genetic analysis <strong>of</strong> a yeast strain<br />
A diploid yeast cell was induced to sporulate by depletion <strong>of</strong> nitrogen from <strong>the</strong> growth<br />
medium. After meiosis, four haploid spores form which are contained in a so-called<br />
ascus. Following enzymatic digestion <strong>of</strong> <strong>the</strong> ascus wall, <strong>the</strong> four spores are separated<br />
manually under <strong>the</strong> microscope and are put onto a petri dish with growth medium. Each<br />
column on <strong>the</strong> petri dish represents a complete tetrad with four individual spores.<br />
Selected Publications<br />
Pannek, A and Katrin Stade, K. (2006) Nuclear Import and<br />
Export. Encyclopedic Reference <strong>of</strong> Genomics and Proteomics in<br />
Molecular Medicine Ganten, D. and Ruckpaul, K. (eds) Springer<br />
Verlag, Heidelberg, New York.<br />
Cronshaw, JM and Matunis, M. (2004) The nuclear pore complex:<br />
disease associations and functional correlations. Trends in<br />
Endocrinology and Metabolism 15, 34-39.<br />
Stade, K, Vogel, F, Schwienhorst, I, Meusser, B, Volkwein, C,<br />
Nentwig, B, Dohmen, RJ and Sommer, T. (2002). A lack <strong>of</strong> SUMO<br />
conjugation affects cNLS-dependent nuclear protein import in<br />
yeast J. Biol. Chem. 277, 49554-49561.<br />
100 Cancer Research