Thesis final - after defense-7 - Jacobs University

More documents

Recommendations

Info

Acknowledgement All praise for Almighty ALLAH, Without Allah’s help, I would not be able to achieve anything in my life. I am greatly honored to owe my deepest thanks to my thesis supervisor Prof. Dr. Marcelo Fernández-Lahore for giving me the opportunity to carry out my PhD work under his kind supervision and accepting me in his international group. I greatly appreciate his valuable suggestions and supervision in my PhD work. I am highly thankful to him for accepting my wife as a graduate student under his kind supervision. He has given me an opportunity to perform my tasks independently which increased my curiosity for research and which accomplishes the true spirits of PhD. I am thankful for his student friendly and cooperative attitude in the last four years. I am also thankful to Prof. Dr. Matthias Ullrich and Dr. Abid Riaz Ahmad for their comments and nice suggestions for the improvement of the thesis. I also want to thank and acknowledge Muhammed Mobashir and Abdul Wakeel for helping me in the bioinformatics part of this work. I convey my heartiest acknowledgements to my group fellows Aasim, Zia, Nadia, Noor Shad, Farhat, Amir, Tuhidul Islam, Sirma, Amira, Rajesh, Dr Rami, Dr. Sonja, Miss. Nina, Antonio, Doreen, Iza, Naveen, Prasad, Rodrigo and Zumrad. Words are lacking to present my feeling for the prayers and struggles done by my parents throughout my life from childhood until now. I am now in this position due to my father continuous guidance and efforts during my education. I am also thankful to my brother Naveed Ali, sisters and brother in law; Sadeeq and Sabir for their love and care at each step of my life. I also want to acknowledge my other relatives and uncles Mumtaz Ali, Ihsan Ali, Qamer Zaman and my cousins Nazrali, Mohsin, Jenab, Aasim, Zafar, Amin, Khaild. I
I also want to mention the efforts of my wife Nadia for her patience and support during my PhD studies when I was in tough time of having funding and other research problems. I am also thankful to her for letting me free from other homely responsibilities when I was busy in my research work. I also want to convey my heartiest and sincerest acknowledgements to my closest friends Ammar, Qasim, Aasim, Yaqoob, Noor Muhammad saib, Abunaser saib, Farhan, Hamish saib, Farrukh saib, Roohalamin saib, Noor Shad, Zia, Wakeel, Sadiq, Amna, Farhat, Qazi, Hazir, Tariq, Inam, Tahir, Ali, Imran, Rehan, Saleem, Shahzad. Finally, I wish to thank Kohat <strong>University</strong> of Science and Technology (KUST), Khyber Pukhtunkhwa, Pakistan and Higher Education Commission, Islamabad, Pakistan for providing me opportunity for higher studies abroad. II
Page 1: A proteome wide approach to underst
Page 5 and 6: Dedication To my father Haji Sher A
Page 7 and 8: Table of Contents 1. Introduction .
Page 9 and 10: 3.3.2.2. Protein distributions on 2
Page 11 and 12: Chapter 1 1. Introduction 1.1. Intr
Page 13 and 14: Chapter 1 cell proteome to facilita
Page 15 and 16: Chapter 1 proteins. It is this diff
Page 17 and 18: Chapter 1 Salt conc. decreasing (Gr
Page 19 and 20: Chapter 1 The ions at the start of
Page 21 and 22: Chapter 1 exposure of hydrophobic r
Page 23 and 24: Chapter 1 based on the surface hydr
Page 25 and 26: Chapter 1 1.5. Analysis of the yeas
Page 27 and 28: Chapter 1 molecular weight impuriti
Page 29 and 30: Chapter 1 followed by its introduct
Page 31 and 32: Chapter 1 protein towards purificat
Page 33 and 34: Chapter 2 EXPERIMENTAL APPROACH
Page 35 and 36: Chapter 2 Yeast cell proteome and c
Page 37 and 38: Chapter 2 ligands (Toyopearl-Hexyl,
Page 39 and 40: Chapter 2 number of spots was count
Page 41 and 42: Chapter 2 (http://www.matrixscience
Page 43 and 44: Chapter 3 RESULTS AND DISCUSSION
Page 45 and 46: Chapter 3 to the retention behavior
Page 47 and 48: Chapter 3 investigate the hydrophob
Page 49 and 50: Chapter 3 the interior of the prote
Page 51 and 52: Chapter 3 A B C Figure 9: The cryst
Page 53 and 54:
Chapter 3 of the comparative analys
Page 55 and 56:
Chapter 3 Figure 11: Represent the
Page 57 and 58:
Chapter 3 Ether, some 2-D gels were
Page 59 and 60:
Chapter 3 Figure 13: Represent 2-D
Page 61 and 62:
Chapter 3 Table 5. List of the iden
Page 63 and 64:
Chapter 3 Table 7. List of the iden
Page 65 and 66:
Chapter 3 amino acids by Cowan-Whit
Page 67 and 68:
Chapter 3 Figure 15 C: Represents t
Page 69 and 70:
Chapter 3 Figure 16 A: Represents t
Page 71 and 72:
Chapter 3 The polarity value for th
Page 73 and 74:
Chapter 3 Figure 17: Represents the
Page 75 and 76:
Page 77 and 78:
Chapter 3 published papers with mod
Page 79 and 80:
Chapter 3 ligands revealed less dif
Page 81 and 82:
Chapter 3 3.2. Influence of the dif
Page 83 and 84:
Chapter 3 Table 10: The chemistry o
Page 85 and 86:
Chapter 3 where approximately 50% o
Page 87 and 88:
Chapter 3 3.2.3.2. The electrophore
Page 89 and 90:
Chapter 3 Figure 22: Represent 2-D
Page 91 and 92:
Chapter 3 Table 12. List of the ide
Page 93 and 94:
Chapter 3 Table 14. List of the ide
Page 95 and 96:
Chapter 3 r 2 values from the data
Page 97 and 98:
Chapter 3 Figure 24 C: Represents t
Page 99 and 100:
Chapter 3 approximately 47%. The me
Page 101 and 102:
Chapter 3 Figure 25 B: Represents t
Page 103 and 104:
Chapter 3 values have been reported
Page 105 and 106:
Chapter 3 towards conformational ch
Page 107 and 108:
Page 109 and 110:
Chapter 3 among the adsorbents were
Page 111 and 112:
Chapter 3 3.3. Protein distribution
Page 113 and 114:
Chapter 3 3.3.2.2. Protein distribu
Page 115 and 116:
Chapter 3 Figure 29 B: Represent th
Page 117 and 118:
Chapter 3 When the number of smalle
Page 119 and 120:
Chapter 3 and hydrophobic interacti
Page 121 and 122:
Chapter 4 CONCLUSIONS
Page 123 and 124:
Chapter 4 • The base supports rev
Page 125 and 126:
Chapter 4 additional understanding
Page 127 and 128:
References 13. Lienqueo, M.E.; Lese
Page 129 and 130:
References 32. Salgado, J.C.; Rapap
Page 131 and 132:
References 52. B.H.J., H. Accessibl
Page 133 and 134:
References 71. Xindu, G. and Regnie
Page 135 and 136:
References 91. Alonso-Orgaz, S.; Mo
Page 137 and 138:
References 112. Gu, Z. and Glatz, C
Page 139:
References 132. Reubsaet, J.L.E. an
show all

Thesis final - after defense-7 - Jacobs University

Create successful ePaper yourself

Delete template?

Save as template?