MOPEX User's Guide - IRSA

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MOPEX User’s Guide You have the choice of using either a single input file or a stack of BCDs to create the PRF. Entering a filename for one of the parameters, Input File or Image Stack File, in the GUI will cause the other to disappear from the Initial Setup options. On the command line, be sure to enter only one of the two inputs. 7.5.2 PRF Estimate Modules: PRF Estimate Initial Setup Command Line Equivale nt: None Default Output Directory: N/A De pe nds on: Initia l Setup PURPOSE INPUT Set up the input files specific to the PRF Estimate pipeline. AnnealStatus Filename: The output file name of a table containing diagnostic information about the fitting used to estimate point source flux and position. The default file name is FitStat.tbl. PRF Coverage Filename: The name of the output coverage map corresponding to the output PRF image. Default is PRFCov.fits. PRF Filename: The name of the output PRF image. Default is PRF.fits. PRF Sigma Filename: The name of the output uncertainty image corresponding to the output PRF. Default is PRFSigma.fits. Star Filename: The name of an optional output image file created using the computed PRF and placing the point source at the center of the central pixel of the image. StatusList Filename: The name of the status file listing all the input images, along with whether or not they were used to create the PRF. If they were not used, the reason for rejection is also listed. Use Refined Pointing: Check this to use the alternate FITS pointing keywords created by the offline pointing refinement script (pointing_refine.pl). Do not switch this on unless you have manually run pointing refinement outside of the normal BCD pipeline products. PRF Estimate 170 PRF Estimate Modules
MOPEX User’s Guide Most users will never use this option, as pointing refinement is not recommended for Spitzer data. If you believe that there is a problem with the pointing of your data with respect to e.g. the 2MASS catalog, please email the Spitzer Helpdesk for assistance. COMMAND LINE INPUT In the Global Parameters section of the namelist: AnnealStatus_file_name = FitStat.tbl PRF_Coverage_file_name = PRFCov.fits PRF_file_name = PRF.fits PRF_Sigma_file_name = PRFSigma.fits Star_file_name = star.fits StatusList_file_name = Status.txt USE_REFINED_POINTING = 0 OUTPUT None DISCUSSION None 7.5.3 PRF Estimate Modules: MedFilter Command Line Equivalent: run_medfilter Default Output Directory: /Medfilter-PRF-Estimate De pe nds On: Initia l Setup; PRF Estimate Initial Setup PURPOSE This module performs a background subtraction of the individual input images. It is another occurrence of the MedFilter module used by Overlap, Mosaic and APEX. There are two options: the Median case (default) and the Sbkg case, which uses a background estimate like that of SExtractor. PRF Estimate 171 PRF Estimate Modules
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MOPEX User’s Guide MOsaicking and
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MOPEX User’s Guide Chapter 4. Ove
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MOPEX User’s Guide 7.4 PRF Estima
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Chapter 1. Introduction MOPEX User
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MOPEX User’s Guide • If you are
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for Linux and Solaris systems, and:
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Chapter 2. Overview of MOPEX MOPEX
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For instructions on how to run MOPE
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2.3.1 Additional Functionality MOPE
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MOPEX User’s Guide mosaic_mask.pl
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MOPEX User’s Guide Choosing the r
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MOPEX User’s Guide photometry), o
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Chapter 3. MOPEX Input MOPEX User
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3.2 MOPEX Input List Files MOPEX Us
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Chapter 4. Overlap (overlap.pl) MOP
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MOPEX User’s Guide 3. Background
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MOPEX User’s Guide Output Directo
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ncpu_multiprocess = 1 default = 1 I
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4.3.3 Overlap Modules: S/N Estimato
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σ = σ 2 readnoise g 2 + σ 2 conf
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MOPEX User’s Guide Generated Head
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OUTPUT MOPEX User’s Guide Generat
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OUTPUT MOPEX User’s Guide Generat
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MOPEX User’s Guide When choosing
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MOPEX User’s Guide offsets and th
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Chapter 5. Mosaicking (mosaic.pl) M
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MOPEX User’s Guide They do not ne
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MOPEX User’s Guide interpolated u
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MOPEX User’s Guide more informati
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MOPEX User’s Guide Pixel by Size:
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OUTPUT None DISCUSSION MOPEX User
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MOPEX User’s Guide This module al
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MOPEX User’s Guide negative numbe
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DISCUSSION MOPEX User’s Guide For
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MOPEX User’s Guide then interpola
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MOPEX User’s Guide This module pe
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DISCUSSION MOPEX User’s Guide Mos
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PURPOSE MOPEX User’s Guide This m
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DISCUSSION No further information.
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MOPEX User’s Guide processed in o
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MOPEX User’s Guide Min Pix Number
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MOPEX User’s Guide Box Median Bia
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MOPEX User’s Guide If coverage >=
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MOPEX User’s Guide Refine Outlier
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MOPEX User’s Guide Reinterpolatio
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PURPOSE MOPEX User’s Guide The in
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MOPEX User’s Guide The tile speci
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MOPEX User’s Guide Standard Devia
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Mosaic Coverage File (mosaic_cov.fi
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There are no user-defined input par
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COMMAND LINE INPUT See INPUT. OUTPU
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MOPEX User’s Guide limitations di
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6.3 Running APEX MOPEX User’s Gui
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MOPEX User’s Guide Point Source D
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Figure 6.1: Overview of the main pr
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Relevant Pipelines: All PURPOSE INP
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NICE = 1 save_namelist = 1 MOPEX Us
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MOPEX User’s Guide Mosaic PRF Fil
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create_unc_mosaic = 1 use_std_to_de
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MOPEX User’s Guide Use Refined Po
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MOPEX User’s Guide Here FLUXCONV
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MOPEX User’s Guide This module cr
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MOPEX User’s Guide In order to ru
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MOPEX User’s Guide from the GUI,
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9.4.2.1 Input Files and Output Dire
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MOPEX User’s Guide Table 9.1: Lis
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9.7.2 APEX User List Multiframe (ap
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9.7.4 Single-frame mode (apex_1fram
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MOPEX User’s Guide Table 9.6: Lis
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Appendix A. Full List of MOPEX Scri
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A.1.3 Under Construction Running MO
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Appendix B. Full List of Modules in
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Mosaic Interpolate run_mosaic_int P
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Running MOPEX on the Command Line a
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B.5 PRF Estimate Modules Running MO
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Instrument PRF Samp c Norm Radius (
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Some Tips for MOPEX with Spitzer Da
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