MOPEX User's Guide - IRSA

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MOPEX User’s Guide Table 9.5: List of options that can be called from the command line when running apex_1frame.pl or apex_user_list_1frame.pl Option Flag Specification File (example) Default Location Required/Optional -n namelist of input parameters (apex_1frame.nl) ./cdf/ required -i input image (mosaic.fits) ./ required -u name of user input source list (user_list.tbl) ./ required for User List mode only. -m PRF map (PRFmap.tbl) ./cal/ either a PRF map or a PRF image is required -p PRF image (PRF.fits) ./cal/ either a PRF map of a PRF image is required -s input uncertainty image (mosaic_unc.fits) -C input coverage map image (mosaic_cov.fits) -d DCE status mask image (mosaic_imask.fits) -M permanently damaged pixel mask image (pmask.fits) -R outlier mask image (mosaic_rmask.fits) ./ optional ./ optional ./ optional ./cal/ optional ./ optional -O Output directory ./ optional Running MOPEX on the Command Line 234 Running APEX on the command line
MOPEX User’s Guide Table 9.6: List of options that can be called from the command line when running apex_qa.pl in single-frame mode (i.e. with apex_1frame.pl) Option Flag Specification File (example) Default Location Required/Optional -n namelist for creating residual images (apex_qa.nl) ./cdf/ required -T input image (mosaic.fits) ./ required -E point source list from apex_1frame.pl (extract.tbl) ./ required -P mosaic PRF image (PRF.fits) ./cal/ required -F Fiducial Image Frame file (FIF.tbl) .// optional -O Output directory ./ optional 9.8 Running PRF Estimate on the command line PRF Estimate is run on the command line using the script prf_estimate.pl. The script expects a list of FITS images and a namelist file as input. The format of the input list is given in §3.2 MOPEX Input List Files, and the format of the namelist is described in §9.4. The syntax for running PRF Estimate is as follows: unix% prf_estimate.pl where and the associated are given in Table 9.7. The default locations for all of the files except for the namelist file can be overridden by providing the full path name, for example: unix% prf_estimate.pl -n prf_estimate_M1.nl -i /data/MIPS24/mosaic.fits Running MOPEX on the Command Line 235 Running PRF Estimate on the command line
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MOPEX User’s Guide MOsaicking and
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MOPEX User’s Guide Chapter 4. Ove
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MOPEX User’s Guide 7.4 PRF Estima
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Chapter 1. Introduction MOPEX User
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MOPEX User’s Guide • If you are
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for Linux and Solaris systems, and:
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Chapter 2. Overview of MOPEX MOPEX
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For instructions on how to run MOPE
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2.3.1 Additional Functionality MOPE
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MOPEX User’s Guide mosaic_mask.pl
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MOPEX User’s Guide Choosing the r
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MOPEX User’s Guide photometry), o
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Chapter 3. MOPEX Input MOPEX User
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3.2 MOPEX Input List Files MOPEX Us
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Chapter 4. Overlap (overlap.pl) MOP
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MOPEX User’s Guide 3. Background
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MOPEX User’s Guide Output Directo
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ncpu_multiprocess = 1 default = 1 I
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4.3.3 Overlap Modules: S/N Estimato
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σ = σ 2 readnoise g 2 + σ 2 conf
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MOPEX User’s Guide Generated Head
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OUTPUT MOPEX User’s Guide Generat
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OUTPUT MOPEX User’s Guide Generat
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MOPEX User’s Guide When choosing
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MOPEX User’s Guide offsets and th
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Chapter 5. Mosaicking (mosaic.pl) M
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MOPEX User’s Guide They do not ne
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MOPEX User’s Guide interpolated u
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MOPEX User’s Guide more informati
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MOPEX User’s Guide Pixel by Size:
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OUTPUT None DISCUSSION MOPEX User
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MOPEX User’s Guide This module al
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MOPEX User’s Guide negative numbe
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DISCUSSION MOPEX User’s Guide For
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MOPEX User’s Guide then interpola
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MOPEX User’s Guide This module pe
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DISCUSSION MOPEX User’s Guide Mos
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PURPOSE MOPEX User’s Guide This m
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DISCUSSION No further information.
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MOPEX User’s Guide processed in o
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MOPEX User’s Guide Min Pix Number
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MOPEX User’s Guide Box Median Bia
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MOPEX User’s Guide If coverage >=
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MOPEX User’s Guide Refine Outlier
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MOPEX User’s Guide Reinterpolatio
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PURPOSE MOPEX User’s Guide The in
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MOPEX User’s Guide The tile speci
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MOPEX User’s Guide Standard Devia
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Mosaic Coverage File (mosaic_cov.fi
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There are no user-defined input par
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COMMAND LINE INPUT See INPUT. OUTPU
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MOPEX User’s Guide limitations di
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6.3 Running APEX MOPEX User’s Gui
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MOPEX User’s Guide Point Source D
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Figure 6.1: Overview of the main pr
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Relevant Pipelines: All PURPOSE INP
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NICE = 1 save_namelist = 1 MOPEX Us
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MOPEX User’s Guide Mosaic PRF Fil
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create_unc_mosaic = 1 use_std_to_de
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MOPEX User’s Guide Use Refined Po
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MOPEX User’s Guide Here FLUXCONV
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MOPEX User’s Guide This module cr
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MOPEX User’s Guide year) and with
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MOPEX User’s Guide Mosaic FIF Tab
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MOPEX User’s Guide Tile BCD file
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MOPEX User’s Guide Window X, Y: (
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MOPEX User’s Guide neighboring pi
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⎛ ⎜ ⎜ P( j) = ⎜ 1+ ⎜ ⎜
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&END MOPEX User’s Guide if use_ps
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MOPEX User’s Guide \float Tile_Of
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MOPEX User’s Guide Input Type: De
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MOPEX User’s Guide pixels set to
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MOPEX User’s Guide This module co
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MOPEX User’s Guide is recorded as
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&END OUTPUT MOPEX User’s Guide Th
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INPUT Columns selection: MOPEX User
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PURPOSE MOPEX User’s Guide Fits t
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MOPEX User’s Guide given below. O
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6.5.19 APEX Modules: Aperture Photo
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MOPEX User’s Guide This module al
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Condition Builder: Some simple sele
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MOPEX User’s Guide Fatal Mask Bit
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MOPEX User’s Guide Pixel by Size:
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MOPEX User’s Guide Mosaic PRF Fil
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PRF_ResampleX_Factor = 100, PRF_Res
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7.3 Running PRF Estimate MOPEX User
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MOPEX User’s Guide 3. Outlier Rej
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PURPOSE MOPEX User’s Guide Set up
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MOPEX User’s Guide Most users wil
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DISCUSSION MOPEX User’s Guide Wit
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7.5.5 PRF Estimate Modules: Split B
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MOPEX User’s Guide Fit Seed: (int
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Chapter 8. Basic Concepts in MOPEX
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8.2 Outlier Detection MOPEX User’
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Page 243 and 244: Appendix A. Full List of MOPEX Scri
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