MOPEX User's Guide - IRSA

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9.7.3 APEX QA Multiframe (apex_qa.pl) Residual image creation for APEX Multiframe is run on the command line as follows: unix% apex_qa.pl MOPEX User’s Guide where and the associated are given in Table 9.4. As with the apex.pl script, default locations for all of the files except for the namelist file can be overridden by providing the full path name. Table 9.4: List of options that can be called from the command line when running apex_qa.pl in multiframe mode (i.e. with apex.pl or apex_user_list.pl) Option Flag Specification File (example) Default Location Required/Optional -n namelist for creating residual images (apex_qa.nl) -u namelist for mosaicking of residual images (mosaic_qa.nl) -E point source list from apex.pl (extract.tbl) ./cdf/ required ./cdf/ required ./ required -I (capital i) list of input images (ImageList.txt) ./ required -m PRF map (PRFmap.tbl) ./cal/ either a PRF map or a PRF image is required -p PRF image (PRF.fits) ./cal/ either a PRF map of a PRF image is required -S list of input uncertainty images (SigmaList.txt) -d list of DCE status mask images (IMaskList.txt) -M permanently damaged pixel mask image (pmask.fits) -R list of outlier mask images (RMaskList.txt) ./ optional ./ optional ./cal/ optional ./ optional -F Fiducial Image Frame file (FIF.tbl) .// optional -O Output directory ./ optional Running MOPEX on the Command Line 232 Running APEX on the command line
9.7.4 Single-frame mode (apex_1frame.pl) MOPEX User’s Guide APEX Single Frame is carried out on the command line using the Perl wrapper script apex_1frame.pl. The syntax is as follows: unix% apex_1frame.pl where and the associated are given in Table 9.5. The default locations for all of the files except for the namelist file can be overridden by providing the full path name, for example: unix% apex_1frame.pl -n apex_1frame_I1.nl -i /data/IRAC/mosaic_ch1.fits See Chapter 3 on MOPEX Input for more information on the input image and list files, and §9.4 for a description of the namelist file. 9.7.5 APEX User List Single Frame (apex_user_list_1frame.pl) APEX User List Single Frame is run as follows: unix% apex_user_list_1frame.pl The available options are the same as for APEX Single Frame, with the addition of one more flag, -u. See Table 9.5 for the available input options. 9.7.6 Single Frame Residual Image Creation (apex_qa.pl) Residual image creation for APEX Single Frame is run on the command line as follows: unix% apex_qa.pl where and the associated are given in Table 9.6. As with the apex_1frame.pl script, default locations for all of the files except for the namelist file can be overridden by providing the full path name. Running MOPEX on the Command Line 233 Running APEX on the command line
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MOPEX User’s Guide MOsaicking and
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MOPEX User’s Guide Chapter 4. Ove
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MOPEX User’s Guide 7.4 PRF Estima
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Chapter 1. Introduction MOPEX User
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MOPEX User’s Guide • If you are
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for Linux and Solaris systems, and:
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Chapter 2. Overview of MOPEX MOPEX
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For instructions on how to run MOPE
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2.3.1 Additional Functionality MOPE
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MOPEX User’s Guide mosaic_mask.pl
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MOPEX User’s Guide Choosing the r
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MOPEX User’s Guide photometry), o
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Chapter 3. MOPEX Input MOPEX User
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3.2 MOPEX Input List Files MOPEX Us
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Chapter 4. Overlap (overlap.pl) MOP
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MOPEX User’s Guide 3. Background
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MOPEX User’s Guide Output Directo
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ncpu_multiprocess = 1 default = 1 I
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4.3.3 Overlap Modules: S/N Estimato
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σ = σ 2 readnoise g 2 + σ 2 conf
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MOPEX User’s Guide Generated Head
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OUTPUT MOPEX User’s Guide Generat
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OUTPUT MOPEX User’s Guide Generat
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MOPEX User’s Guide When choosing
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MOPEX User’s Guide offsets and th
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Chapter 5. Mosaicking (mosaic.pl) M
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MOPEX User’s Guide They do not ne
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MOPEX User’s Guide interpolated u
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MOPEX User’s Guide more informati
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MOPEX User’s Guide Pixel by Size:
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OUTPUT None DISCUSSION MOPEX User
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MOPEX User’s Guide This module al
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MOPEX User’s Guide negative numbe
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DISCUSSION MOPEX User’s Guide For
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MOPEX User’s Guide then interpola
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MOPEX User’s Guide This module pe
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DISCUSSION MOPEX User’s Guide Mos
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PURPOSE MOPEX User’s Guide This m
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DISCUSSION No further information.
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MOPEX User’s Guide processed in o
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MOPEX User’s Guide Min Pix Number
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MOPEX User’s Guide Box Median Bia
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MOPEX User’s Guide If coverage >=
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MOPEX User’s Guide Refine Outlier
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MOPEX User’s Guide Reinterpolatio
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PURPOSE MOPEX User’s Guide The in
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MOPEX User’s Guide The tile speci
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MOPEX User’s Guide Standard Devia
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Mosaic Coverage File (mosaic_cov.fi
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There are no user-defined input par
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COMMAND LINE INPUT See INPUT. OUTPU
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MOPEX User’s Guide limitations di
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6.3 Running APEX MOPEX User’s Gui
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MOPEX User’s Guide Point Source D
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Figure 6.1: Overview of the main pr
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Relevant Pipelines: All PURPOSE INP
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NICE = 1 save_namelist = 1 MOPEX Us
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MOPEX User’s Guide Mosaic PRF Fil
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create_unc_mosaic = 1 use_std_to_de
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MOPEX User’s Guide Use Refined Po
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MOPEX User’s Guide Here FLUXCONV
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MOPEX User’s Guide This module cr
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MOPEX User’s Guide year) and with
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MOPEX User’s Guide Mosaic FIF Tab
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MOPEX User’s Guide Tile BCD file
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MOPEX User’s Guide Window X, Y: (
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MOPEX User’s Guide neighboring pi
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⎛ ⎜ ⎜ P( j) = ⎜ 1+ ⎜ ⎜
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&END MOPEX User’s Guide if use_ps
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MOPEX User’s Guide \float Tile_Of
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MOPEX User’s Guide Input Type: De
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MOPEX User’s Guide pixels set to
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MOPEX User’s Guide This module co
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MOPEX User’s Guide is recorded as
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&END OUTPUT MOPEX User’s Guide Th
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INPUT Columns selection: MOPEX User
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PURPOSE MOPEX User’s Guide Fits t
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MOPEX User’s Guide given below. O
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6.5.19 APEX Modules: Aperture Photo
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MOPEX User’s Guide This module al
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Condition Builder: Some simple sele
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MOPEX User’s Guide Fatal Mask Bit
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MOPEX User’s Guide Pixel by Size:
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MOPEX User’s Guide Mosaic PRF Fil
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PRF_ResampleX_Factor = 100, PRF_Res
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7.3 Running PRF Estimate MOPEX User
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MOPEX User’s Guide 3. Outlier Rej
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PURPOSE MOPEX User’s Guide Set up
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MOPEX User’s Guide Most users wil
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DISCUSSION MOPEX User’s Guide Wit
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7.5.5 PRF Estimate Modules: Split B
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MOPEX User’s Guide Fit Seed: (int
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Chapter 8. Basic Concepts in MOPEX
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