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John M. S. Bartlett.pdf - Bio-Nica.info

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44 Pearson<br />

7. Add 60 µL of chloroform/isoamyl alcohol (241) and vortex vigorously.<br />

8. Place on ice for 15 min.<br />

9. Microfuge at 12,000g for 5 min and transfer the upper phase to new microfuge tube.<br />

10. Add 200 µL of ice-cold isopropanol mix and store at –20°C for 30 min.<br />

11. Microfuge at 12,000g for 15 min and discard supernatant.<br />

12. Resuspend pellet in 200 µL of extraction buffer.<br />

13. Repeat steps 3 through 9.<br />

14. Wash pellet with 400 µL of cold 70% ethanol.<br />

15. Microfuge at 12,000g for 5 min and discard supernatant.<br />

16. Carefully remove last traces of ethanol from tube (folded sterile swab or kimwipe works<br />

well).<br />

17. Resuspend in 100 µL of distilled water and incubate at 50°C for 15 min to dissolve RNA<br />

(see Note 4).<br />

4. Notes<br />

1. Blood stored at room temperature or 4°C should be mixed thoroughly prior to aliquots<br />

being removed.<br />

2. Frozen blood samples should be allowed to thaw completely and mixed thoroughly before<br />

aliquots being removed. Although freezing lyses red blood cells, the red cell lysis step<br />

should still be performed to efficiently remove hemoglobin from the sample. Repeated<br />

freeze/thaw cycles should be avoided.<br />

3. Buffy coat contains two to four times the amount of white blood cells per volume compared<br />

to fresh blood. Therefore, it is advisable to use only 50 µL of buffy coat diluted with 50 µL<br />

of phosphate-buffered saline as starting material for this protocol.<br />

4. Repeat pipetting through a narrow gauge tip can help this process.<br />

References<br />

1. Chomczynski, P. and Sacchi. N. (1987) Single-step method of RNA isolation by acid<br />

guanidinium thiocyanate-phenol-chloroform extraction. Anal. <strong>Bio</strong>chem. 162, 156–159.

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