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Tecnai on-line help manual -- Alignments - UT Southwestern

Tecnai on-line help manual -- Alignments - UT Southwestern

Tecnai on-line help manual -- Alignments - UT Southwestern

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<str<strong>on</strong>g>Tecnai</str<strong>on</strong>g> <strong>on</strong>-<strong>line</strong> <strong>help</strong> <strong>Alignments</strong> 21<str<strong>on</strong>g>Tecnai</str<strong>on</strong>g> 12 Software versi<strong>on</strong> 2These diagrams show schematically how the beam positi<strong>on</strong> wouldchange as a functi<strong>on</strong> of spot number when spots 3 and 9 are used forgun shift alignment (left) and spots 1 and 11 (right). For spots 3 and 9the overall shift is smaller. The remaining deviati<strong>on</strong>s are corrected bythe spot-size dependent gun shift.4.4 Spot-size dependent gun shiftPurpose: Set the exact gun shift for all spots individually.Importance: ESSENTIAL for minimizing movements between different spot sizes and for having thebeam correctly al<strong>on</strong>g the optical axis for all spot sizes.Method: Align all spots relative to spot 9.ProcedureThe spot-size dependent gun shift alignment c<strong>on</strong>sists of three steps:• A first step in which spot 5 is centered with the beam deflecti<strong>on</strong> coils.• A sec<strong>on</strong>d step in which spot 9 is centered with the beam deflecti<strong>on</strong> coils (spot 5 is d<strong>on</strong>e first becausespot 9 may be difficult to find, especially if the beam is defocused).• A third step in which all spots except 11 are centered (setting the spot-dependent gun shift).• A fourth step in which spot 11 is centered (as far as it will go - it may become blocked by a fixedaperture when shifted too far).

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