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Acute Leukemias - Republican Scientific Medical Library

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Molecular Biology and Genetics<br />

Meir Wetzler, Mrózek Kryzstof<br />

Contents<br />

6.1 Introduction .................... 95<br />

6.2 Cytogenetic Aberrations ........... 95<br />

6.3 Structural Aberrations ............. 96<br />

6.3.1 t(9;22)(q34;q11.2) ............ 96<br />

6.3.2 MLL Gene Rearrangements ..... 96<br />

6.3.3 t(4;11)(q21;q23) ............. 97<br />

6.3.4 del(9p) or t(9p) .............. 97<br />

6.3.5 del(12p) or t(12p) ............ 98<br />

6.3.6 t(14q11-q13) ............... 98<br />

6.3.7 Translocations Involving<br />

Band (14q32) Other than<br />

t(8;14)(q24;q32) ............. 99<br />

6.3.8 del(6q) .................... 99<br />

6.3.9 t(1;19)(q23;p13) ............. 99<br />

6.3.10 Extrachromosomal Amplification<br />

of the NUP214/ABL Fusion Gene<br />

in T-Cell ALL ................ 99<br />

6.4 Numerical Aberrations ............ 100<br />

6.4.1 High Hyperdiploidy ........... 100<br />

6.4.2 Hypodiploidy ............... 100<br />

6.4.3 Trisomy 8 .................. 101<br />

6.4.4 Monosomy 7 ............... 101<br />

6.5 Molecular Aberrations ............ 101<br />

6.5.1 Relapse-Classifying Gene Sets .... 101<br />

6.5.2 Resistance-Classifying Gene Sets . . 101<br />

6.5.3 Smad3 .................... 101<br />

6.5.4 FLT3 ..................... 102<br />

6.5.5 TLX1 ..................... 102<br />

6.5.6 Cryptic t(5;14)(q35;q32) and the<br />

Overexpression of the TLX3 Gene 102<br />

6.5.7 NOTCH1 .................. 102<br />

6.5.8 Pharmacogenetics ........... 102<br />

6.6 Future Directions ................ 103<br />

References ......................... 103<br />

6.1 Introduction<br />

<strong>Acute</strong> lymphoblastic leukemia (ALL) is characterized by<br />

distinctive morphologic, cytogenetic, and molecular genetic<br />

features, some of which have important clinical<br />

implications for both diagnosis and predicting response<br />

to specific treatment regimens, while the role of others<br />

is yet to be defined. This chapter will describe the cytogenetic<br />

and molecular aberrations in ALL.<br />

6.2 Cytogenetic Aberrations<br />

Cytogenetic aberrations can be structural, e.g., reciprocal<br />

and unbalanced translocations, deletions, dicentric<br />

chromosomes, or inversions; or numerical, e.g., gain<br />

of a whole chromosome (trisomy) or loss of a whole<br />

chromosome (monosomy). In many instances, molecular<br />

dissection of structural chromosome abnormalities,<br />

especially reciprocal translocations, identified specific<br />

genes associated with leukemogenesis. The most common<br />

structural cytogenetic aberrations and their affected<br />

genes are shown in Table 6.1.

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