Rob van Hest Capture-recapture Methods in Surveillance - RePub ...
Rob van Hest Capture-recapture Methods in Surveillance - RePub ...
Rob van Hest Capture-recapture Methods in Surveillance - RePub ...
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Chapter 7<br />
The research was conducted on mandatory regional registries set up follow<strong>in</strong>g<br />
regional and national law; therefore, accord<strong>in</strong>g to national legislation, no <strong>in</strong>formed<br />
consent is required to obta<strong>in</strong> and store the <strong>in</strong>formation for public health and research<br />
purposes. The authors of the paper were authorised by the regional public health<br />
authorities to keep and analyse the data and to produce reports.<br />
Sources of cases and record-l<strong>in</strong>kage<br />
Three sources were used to identify tuberculosis cases between 2000 and the first half of<br />
2002. The first was the ‘physician notification system’, <strong>in</strong>clud<strong>in</strong>g both notification and<br />
treatment outcome monitor<strong>in</strong>g registers. The second source was the laboratory<br />
tuberculosis register, which collects reports of microscopic and culture identification of<br />
mycobacteria from the regional reference microbiology laboratories. The local public<br />
health service periodically checks these records for false-positive reports due to<br />
environmental mycobacteria and laboratory cross-contam<strong>in</strong>ation. Data from the<br />
‘physician notification system’ and laboratory sources are not rout<strong>in</strong>ely merged and,<br />
accord<strong>in</strong>g to national legislation, only the notification register contributes to the official<br />
national tuberculosis statistics. The third source of cases was the hospital discharge<br />
records register. Hospital discharge records <strong>in</strong>clud<strong>in</strong>g any form of tuberculosis<br />
(International Classification of Diseases-9 codes 0.10-0.18 and 647.3) were selected.<br />
After correction for duplicate entries <strong>in</strong> each of the three registers, the records<br />
of tuberculosis cases were matched by a determ<strong>in</strong>istic l<strong>in</strong>kage procedure us<strong>in</strong>g the<br />
identifiers full name, date of birth and sex. Apparent matches were reviewed to avoid<br />
homonymous and synonymous errors. Prevalent cases diagnosed <strong>in</strong> 2000 were identified<br />
and were excluded from the study, whereas cases <strong>in</strong>cident <strong>in</strong> 2001 were corrected for late<br />
report<strong>in</strong>g <strong>in</strong> the first half of 2002. A case-verification procedure was performed by<br />
<strong>in</strong>spect<strong>in</strong>g the hospital charts of patients identified uniquely <strong>in</strong> this source to improve the<br />
positive predictive value of this register. A similar procedure was not performed for cases<br />
identified <strong>in</strong> the other sources, as case-verification is regularly performed by the public<br />
health care services. We def<strong>in</strong>ed observed source-specific sensitivities as the number of<br />
tuberculosis patients <strong>in</strong> each register divided by the total number of tuberculosis patients<br />
observed after record-l<strong>in</strong>kage. As local tuberculosis surveillance and control guidel<strong>in</strong>es<br />
advise to <strong>in</strong>vestigate the human immunodeficiency virus (HIV) status of adults with<br />
tuberculosis after obta<strong>in</strong><strong>in</strong>g consent, <strong>in</strong>formation on HIV status was also collected.<br />
<strong>Capture</strong>-<strong>recapture</strong> analysis<br />
To use log-l<strong>in</strong>ear models for capture-<strong>recapture</strong> analysis, data from at least three different,<br />
partially overlapp<strong>in</strong>g and preferably <strong>in</strong>dependent sources are necessary. 8,19 The annual<br />
<strong>in</strong>cidence and the estimated source-specific sensitivity (i.e. the number of observed<br />
tuberculosis patients <strong>in</strong> each of the <strong>in</strong>vestigated sources divided by the estimated total<br />
number of tuberculosis patients by capture-<strong>recapture</strong> analysis) of the regional tuberculosis<br />
surveillance system were estimated by a three-sample capture-<strong>recapture</strong> analysis. 19 Pairwise<br />
dependency between sources was <strong>in</strong>corporated <strong>in</strong>to the log-l<strong>in</strong>ear models and<br />
possible capture heterogeneity was tested. <strong>Capture</strong>-<strong>recapture</strong> analysis was conducted on<br />
the full set of data and repeated for subsets def<strong>in</strong>ed accord<strong>in</strong>g to geographical orig<strong>in</strong>,<br />
location of tuberculosis, age group, bacteriological status and site of residence, as<br />
98