Publications:Barnes CA, O’Hagan BMG, Howard CV, McKerr G; Verification <strong>of</strong> cell viability at progressively higher scanning forcesusing a hybrid atomic force and fluorescence microscope; Journal <strong>of</strong> Microscopy, 228: 185-189, November 2007Edwin Lamers, X Frank Walboomers, Maciej Domanski, Joost te Riet 3 , George McKerr, Barry M O’Hagan, CliffordA Barnes, Lloyd Peto, Falco CMJM van Delft, Regina Luttge, Louis Winnubst, Han JGE Gardeniers and John A Jansen;Nanogrooved substrates influence osteoblast-like cell behavior and extracellular matrix deposition; (submitted toNano Letters)Dr O’Hagan and his colleagues are currently preparing manuscripts detailing sample preparation and imagingparameters for biological dual beam microscopy, and comparative electron imaging techniques. In addition, a number<strong>of</strong> joint publications resulting from our collaborations are expected in the near future.Dr Clifford Barnes<strong>Research</strong> AssistantContact Details:T: +44 (0)28 70323028c.barnes@ulster.ac.ukDuring the period 1 st August 2007 to 31 st July 2008, Clifford was employed as a post- doctoral <strong>Research</strong> Assistanton a 3 year contract in the NanoInteract Project, headed by Pr<strong>of</strong>essor Howard and Dr George McKerr.This work involved testing the potential genotoxicity <strong>of</strong> amorphous silica nanoparticles through the use <strong>of</strong> theComet Assay. The results obtained during this period directly challenged a widely cited abstract, which had declaredthat amorphous silica was genotoxic. A close collaboration with the N<strong>of</strong>er Institute <strong>of</strong> Occupational Medicinein Poland was established to ensure results were repeatable across laboratories. A draft paper was presented inPoland at a NanoInteract group meeting. This paper was subsequently submitted for publication in Nano Letters.Clifford’s main <strong>research</strong> interests involve imaging the uptake <strong>of</strong> nanoparticles in cultured cells using a range <strong>of</strong>high-resolution techniques such as Fluorescence and Confocal Microscopy, Environmental, Transmission and HighVacuum Scanning Electron Microscopy and Cryo-Dual Beam Scanning Electron Microscopy. These techniques, inconjunction with stereology, will be used to quantify nanoparticle uptake in a study, which will take place inpartnership with <strong>University</strong> College Dublin.Environmental Scanning Electron imagesFig 3. - Secondary electron image taken in ESEM. Filopodia (labelled F) andlamellipodia (labelled L) are visible. A piece <strong>of</strong> debris (labelled D) is indicatedFig 4. - ESEM backscattered image. Ceria nanoparticles are visible asbright spots. Nucleoli (labelled N) and debris (labelled D) are visible.26
Clifford is responsible for the routine maintenance, alignment and operation <strong>of</strong> the FEI Centre for Advanced Imaging(electron optics including transmission electron microscopy, Environmental scanning electron microscopy, Cry<strong>of</strong>ocused ion beam microscopy). He liaises closely with FEI field engineers and customer support in fault diagnosisand repair. Development and optimization <strong>of</strong> cryo dual beam microscopy for biological samples is the main thrust <strong>of</strong>his work and is ongoing. This includes developing protocols for sample preparation and imaging parameters for bothambient and cryogenic conditions, and have working ‘recipes’ for chemically fixed and unfixed cellular monolayers,resin embedded material and cryo-fractured samples.He has trained a number <strong>of</strong> other users in the use <strong>of</strong> our electron microscopes to the point where they are capable<strong>of</strong> using the instrumentation unsupervised. or with minimal supervision.In addition to the ongoing development <strong>of</strong> biological cryo dual beam microscopy, Clifford is also closely involvedin a number <strong>of</strong> other <strong>research</strong> projects and collaborations with external companies and institutions. These includethe following:• Transmission electron microscopy <strong>of</strong> Nanotube structure (NIBEC).• Cryo-Dualbeam microscopy <strong>of</strong> osteoblast response to nanogrooved substrates. (<strong>University</strong> Nijmegen MedicalCentre, joint publication pending).• FIB nano-machining <strong>of</strong> AFM probe tips (Yael Dror, Oxford).• Cryo FIB, variable pressure ESEM Mitochondrial imaging. (<strong>University</strong> <strong>of</strong> Leicester, joint publication pending).• Temperature variation in SEM chamber during cryo operation (NIBEC).• TEM polymer structure and formation (Chemistry at Queens <strong>University</strong>).• Assistance with Nanotoxicology <strong>research</strong> (NanoInteract).• Assistance with fat emulsion <strong>research</strong> (CAST award with Unilever <strong>Research</strong>, Vlaardigan).• Assistance with investigations into bacterial adhesion to cells (CAST award with Unilever <strong>Research</strong>, Port Sunlight).• Preliminary imaging <strong>of</strong> oil bearing rock core samples. (collaboration with Corex).Publications:Barnes CA, O’Hagan BMG, Howard CV, McKerr G; Verification <strong>of</strong> cell viability at progressively higher scanning forcesusing a hybrid atomic force and fluorescence microscope; Journal <strong>of</strong> Microscopy, 228: 185-189, November 2007Mr Andreas Elsaesser<strong>Research</strong> AssistantContact Details:T: +44 (0)28 70324765a.elsaesser@ulster.ac.ukAndreas Elsaesser studied physics at the Technical <strong>University</strong>, Munich and the <strong>University</strong> <strong>of</strong> Liverpool, United Kingdom.He graduated in 2006 with a Dipl.Phys. (corr. M.Sc.) in Surface and Interface Physics, Nuclear Physics and Astrophysicsand finished his studies investigating Complex Plasmas with ultra-fast Laser-Tomography.Andreas is currently employed as a <strong>research</strong> assistant in the BioImaging <strong>Research</strong> Group working for NanoInteract,a FP6 project investigating interaction mechanisms between nanoparticles and biological systems.<strong>Research</strong> Interests:Interaction <strong>of</strong> Nanoparticles and biological systemsIn order to understand the principle interaction mechanisms <strong>of</strong> nanoparticles and living cells, we measure nanoparticleuptake ratios and pathways <strong>of</strong> nanoparticles in cells using Transmission electron microscopy and Scanning electronmicroscopy.27
- Page 1: BIOMEDICAL SCIENCESRESEARCH INSTITU
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Dr Alison GallagherSenior Lecturer
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In addition, results of a pilot stu
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Dr Maeve KerrResearch AssociateCont
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Kravtsov V, Swain M, Schuster A, Du
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Dr Daniel BerrarLecturer in Biomedi
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Zhang et al; Incorporating Feature
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Bala P, Baldridge K, Benfenati E, C
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In 2009 he was appointed Chairman o
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Dr Raymond BeirneLecturer in Optome
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Dr Julie McClellandLecturer in Opto
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Graham JE, Moore JE, Moore JE, McCl
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Research Staff:Dr David OrrSenior R
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Dr Victoria McGilliganResearch Asso
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Grant Holder Anderson, Prof RSFundi
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Funding Body Royal Irish AcademyAmo
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Student: Simon GenglerTitle: Effect
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CONGRATULATIONS TO THE FOLLOWING PO