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Handbook of Size Exclusion Chromatography and Related ...

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Figure 8 Linear <strong>and</strong> cubic increases due to single <strong>and</strong> triple str<strong>and</strong>ed degradation.<br />

(DP Norwood <strong>and</strong> WF Reed, unpublished results.)<br />

chains (55). The upper left inset inFig. 9shows the action <strong>of</strong>galactosidase on the<br />

GM, which is to strip <strong>of</strong>f the galactose side chains. The signature for this type <strong>of</strong><br />

reaction was predicted to be (56)<br />

Kc0<br />

I(q, t) ¼<br />

1þu(t)=3<br />

Mt,0[fp þ(1 fp)exp( at)] 2þ2A2(t)c0 (20)<br />

whereMt,0 isthetotalinitial polymer mass(¼ Mp þMs,0,whereMs,0 istheinitial<br />

side chain mass), fp, is the initial fraction <strong>of</strong> mass in the backbone, <strong>and</strong><br />

u(t) ¼q 2 kS 2 l z(t) (21)<br />

where kS 2 l z(t) is the mean square z-average radius <strong>of</strong> gyration. It is assumed that<br />

the stripped side chains themselves scatter insignificantly compared to the<br />

remaining backbone. The aboveform will hold for stripping side chains from any<br />

polymer conformation, as long as u,1. For the case <strong>of</strong> stripping from an ideal<br />

r<strong>and</strong>omcoil(whichGMresembles),thenumerator1þu=3canbereplacedbyu=2<br />

for the case where u.3.<br />

The upper right inset to Fig. 9shows the reciprocal scattering signature<br />

when the GM is exposed to mannanase, which can cleave the mannose backbone<br />

thathasno“protection”bygalactosesidechains.Thesignaturecorrespondstothe<br />

© 2004 by Marcel Dekker, Inc.

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