TGQR 2010Q4 Report.pdf - Teragridforum.org

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Publications Listing
A.1. TeraGrid Staff Publications
A.1.1 TeraGrid Staff Publications (for 2010 Q3)
For Q3 2010, the TeraGrid sites reported the following publications authored in whole or in part
by GIG- or RP-funded staff members.
1. Wenjun Wu, Thomas D. Uram, Michael Wilde, Mark Hereld, and Michael E. Papka, A Web 2.0-Based
Scientific Application Framework, 8 th International Conference on Web Services, July 5-10, 2010,
Miami, Florida.
2. Wenjun Wu, Thomas Uram, Michael Wilde, Mark Hereld and Michael E. Papka, Accelerating Science
Gateway Development with Web 2.0 and Swift, TeraGrid 2010 Conference, Pittsburgh, Pennsylvania,
August 2-5, 2010.
3. Dooley R., Dahan M. 2010 “TeraGrid ’10”, Action Folders
4. Dooley R. 2010 “Proceedings of The International Workshop on Science Gateways 2010”, Recipes for
Success in New Science Gateway Development
5. Dooley R., Dahan M. 2010 “TeraGrid ’10”, The TeraGrid Mobile User Portal: Ticketing, Data, and
Complete Job Management On The Go
6. Dooley R., Dahan M. 2010 “TeraGrid ’10”, Comprehensive File Management in the TeraGrid
7. Daruru S., Dhandapani S., Gupta G., Iliev I., Xu W., Navratil P., Marin N., Ghosh J. 2010 “Proceedings
of International Workshop on Knowledge Discovery Using Cloud and Distributed Computing Platforms
(KDCloud, 2010) in Cooperation with IEEE ICDM 2010”, Distributed, Scalable Clustering for Detecting
Halos in Terascale Astronomy
8. Jordan C., 2010 “26 th IEEE (MSST2010) Symposium on Massive Storage Systems and Technologies”,
Data Infrastructure in the TeraGrid
9. Willmore F., Rosales C., Cazes J. 2010 “TeraGrid ‘10”, Experiences with the Distributed Debugging
Tool
10. Navratil, P. 2010 “Dissertation, The University of Texas at Austin”, Memory Efficient, Scalable Ray
Tracing
11. Jeong B., Abram G., Johnson G., Navratil P. 2010 “NVIDIA GTC Conference”, Large-Scale
Visualization Using a GPU Cluster
12. Wilkins-Diehr, N., Lawrence, K., "Opening Science Gateways to Future Success: The Challenges of
Gateway Sustainability", accepted for Gateway Computing Environments workshop, November, 2010.
13. Wilkins-Diehr, N., Baru, C., Gannon, D., Keahey, K., McGee, J., Pierce, M., Wolski, R., Wu, W.
"Science Gateways: Harnessing Clouds and Software Services for Science" in Cloud Computing and
Software Services: Theory and Techniques, edited by Syed A. Ahson and Mohammad Ilyas. [Boca
Raton: CRC Press, 2011].
14. H. Karimabadi, H. X. Vu, B. Loring, Y. Omelchenko, M. Tatineni, A.
15. Majumdar, and J. Dorelli, "Enabling Breakthrough Kinetic Simulations of the Magnetosphere Using Petascale
Computing," Asia Oceania Geosciences Society (AOGS) Hyderabad, India, July 5-9, 2010
16. H. Karimabadi, H. X. Vu, B. Loring, Y. Omelchenko, M. Tatineni, A.
17. Majumdar, and J. Dorelli, "3D Global Hybrid Simulations of the Magnetosphere and I/O Strategies for Massively
Parallel Kinetic Simulations,” TG10, Pittsburgh, August 2-5, 2010
18. Xu, D., Williamson, M.J., Walker, R.C., "Advancements in Molecular Dynamics Simulations of
Biomolecules on Graphical Processing Units.", Ann. Rep. Comp. Chem., vol 6. 2010, 2-19 (Chapter 1).
19. Goetz, A.W., Woelfe, T., Walker, R.C., "Quantum Chemistry on Graphics Processing Units", Ann. Rep.
Comp. Chem., vol 6. 2010, 21-35 (Chapter 2).
20. "Creating the CIPRES Science Gateway for Inference of Large Phylogenetic Trees" by M.A. Miller, W. Pfeiffer,
and T. Schwartz was submitted and accepted for presentation at the GCE10 workshop in conjunction with SC10.
21. Y. Cui, K. Olsen, T. Jordan, K. Lee, J. Zhou, P. Small, G. Ely, D. Roten, D. K. Panda, A. Chourasia, J.
Levesque, S. Day and P. Maechling (2010). “Scalable Earthquake Simulation on Petascale
Supercomputers”, to be presented at Supercomputing 2010, New Orleans, Nov 2010