TGQR 2010Q4 Report.pdf - Teragridforum.org

487. Mamonova T., Wang B., Kurnikova M. and Friedman P.A. Modeling and Mutation of NHERF1
Dimerization Domains, Biophys.J.98 (3), Suppl. 58a (2010).
MCB110028
488. N. Haspel, D. Zanuy, R. Nussinov, T. Teesalu, E. Ruoslahti and C. Aleman, Binding of a C-end rule
peptide to neuropilin-1 receptor: A molecular modeling approach. To be submitted, 2010.
Ocean Sciences
OCE030007
489. Boe, J., A. Hall, F. Colas, J. C. McWilliams, X. Qu, and J. Kurian, What shapes mesoscale wind
anomalies in coastal upwelling zones, Clim. Dyn., submitted, 2010.
490. Buijsman, M. C., Y. Kanarska, and J. C. McWilliams, On the generation and evolution of nonlinear
internal waves in the South China Sea, J. Geophys. Res., 115, C02012, 2010a.
491. Buijsman, M. C., J. C. McWilliams, and C. R. Jackson, East-west asymmetry in nonlinear internal waves
from Luzon Strait, J. Geophys. Res., in press, 2010b.
492. Buijsman, M. C., Y. Uchiyama, J. C. McWilliams, and C. Hill-Lindsay, Internal tides in the Southern
California Bight, J. Geophys. Res., submitted, 2010c.
493. Colas, F., X. Capet, and J. C. McWilliams, Eddy fluxes and induced circulation in Eastern Boundary
Systems, in preparation, 2010.
494. Colas, F., J. C. McWilliams, X. Capet, and J. Kurian, Heat balance and eddies in the Peru-Chile Current
System, submitted, 2010.
495. Colas, F., M. J. Molemaker, J. C. McWilliams, and X. Capet, Regimes of near-surface submesoscale
dynamics in Eastern Boundary Systems, in preparation, 2010.
496. Dong, C., E. Y. Idica, and J. C. McWilliams, Circulation and multiple-scale variability in the Southern
California Bight, J. Phys. Oceanogr., 82, doi:10.1016/j.pocean.2009.07.005, 2009.
497. Dong, C., and J. C. McWilliams, Island wakes in shallow water, J. Phys. Oceanogr., in preparation,
2010.
498. Dong, C., J. C. McWilliams, A. Hall, and M. Hughes, Numerical simulation of a synoptic event in the
Southern California Bight, J. Geophys. Res., submitted, 2010a.
499. Dong, C., P. Sangra, Y. Liu, J. C. McWilliams, and M. Hughes, Island effects on the Canary Current, J.
Geophys. Res., in preparation, 2010b.
500. Gruber, N., Z. Lachkar, H. Frenzel, P. Marchesiello, M. M¨unnich, and J. C. McWilliams, Mesoscale
eddyinduced reduction of biological production in eastern boundary upwelling systems, Nature, 2010.
501. Idica, E., 2010, Contaminant Transport in the Southern California Bight, Ph.D. thesis, Dept. of Civil and
Environmental Engineering, University of California, Los Angeles.
502. Jin, X., C. Dong, J. Kurian, J. C. McWilliams, D. B. Chelton, and Z. Li, SST-wind interaction in coastal
upwelling: Oceanic simulation with empirical coupling, J. Phys. Oceanogr., 39, 2957–2970, 2009.
503. Jin, X., N. Gruber, C. Deutsch, H. Frenzel, Z. Lachkar, D. Loher, J. C. McWilliams, and T. Nagai, The
impact of the coastal ocean on global biogeochemical cycles from both global and regional model
simulations, Global Biogeochem. Cycles, in preparation, 2010.
504. Kurian, J., F. Colas, X. Capet, J. C. McWilliams, and D. B. Chelton, Eddy properties in the California
Current System, in preparation, 2010.
505. LeMari´e, F., J. C. McWilliams, A. F. Shchepetkin, L. Debreu, and M. J. Molemaker, Minimizing spurious
diapycnal mixing associated with tracer advection, Ocean Modell., in preparation, 2010.
506. Li, Z., K. Ide, Y. Chao, and J. C. McWilliams, A multi-scale three-dimensional variational data
assimilation system for coastal ocean forecasting systems, in preparation, 2010.
507. Mason, E., 2009, High-resolution modelling of the Canary Basin oceanic circulation, Ph.D. thesis,
Universidad de Las Palmas de Gran Canaria.
508. Mason, E., F. Colas, J. Molemaker, A. F. Shchepetkin, C. Troupin, J. C. McWilliams, and P. Sangra,
Seasonal variability in the Canary Basin: a numerical study, J. Geophys. Res., submitted, 2010a.
509. Mason, E., M. J. Molemaker, A. Shchepetkin, F. Colas, J. C. McWilliams, and P. Sangra, Procedures
for offline grid nesting in regional ocean models, Ocean Modell., 35, 1–15, 2010b.
510. McWilliams, J. C., A perspective on submesoscale geophysical turbulence, in Proceedings of Newton
Institute Conference on The Nature of High Reynolds Number Turbulence, Oct. 30, 2008 to Dec. 12,
2008, in press, 2010.
511. McWilliams, J. C., and F. Colas, Climate heat balance off western south america: regional oceanic
circulation and eddies, CLIVAR Exchanges Newsletter, 53, 14–16, 2010.
512. McWilliams, J. C., F. Colas, and M. J. Molemaker, Cold filamentary intensification and oceanic surface
convergence lines, Geophys. Res. Lett., 36, L18602, doi:10.1029/2009GL039402, 2009.