TGQR 2010Q4 Report.pdf - Teragridforum.org

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for Efficient Nutrient Absorption in the Small Intestine, PI Brasseur, Penn State Systematics of Nuclear Surface Vibrations in Deformed Nuclei, PI Engel, U. North Carolina Simulations of Molecular Clouds and Protoplanetary Disks, PI Mac Low, American Museum of Natural History Structural and Functional Characterization of Glu-Plasminogen and Lys- Plasminogen, PI Kim, CMU Design of Communicating Colonies of Biomimetic Microcapsules, PI Kolmakov, Univ. of Pittsburgh Computational Modeling of Ultracold Molecular Collisions and Reactions Involving Clusters and Nanoparticles, PI Naduvalath, UNLV Development of Novel HIV Entry Inhibitors Using the ROCS Shaped Based Matching Algorithm and Molecular Dynamics Studies of gp120 Envelop Proteins, PI LaLonde, Bryn Mawr 03/11 NICS, TACC Continuing through 03/11 PSC Continuing through 03/11 PSC Continuing through 03/11 TACC, NCSA SDSC, Continuing 03/11 through NICS, PSC Continuing through 03/11 PSC Continuing through 03/11 46
College Simulation and Data Analysis of Macro- Molecular Systems, PI Blaisten-Barojas, Ge<strong>org</strong>e Mason University Applications of Bispeptide Nanostructures, PI Schafmeister, Temple University Finite-elements Modeling of Singleand Poly-Crystalline Material Removal Including Crystallographic Effects, PI Ozdoganlar, CMU Modeling Geological Sequestration of Carbon Dioxide in a Deep Saline Reservoir Using the TOUGH2 Simulator, PI Valocchi, UIUC Multi-Scale and Isotropy in Rotating Turbulence, PI Pouquet, NCAR Variational Approach to Reservoir Stimulation for Enhanced Geothermal Systems, PI Bourdin, LSU DREAM Assessment Using Octave Open Source Software, PI Surfleet, Oregon State University Cyberinfrastructure to Support Science and Data Management of the Dark Energy Survey, PSC Continuing through 03/11 NICS Continuing through 04/11 PSC Continuing through 03/11 NCSA Continuing through 03/11 PSC, NICS Continuing through 06/11 TACC Continuing through 06/11 Purdue Continuing through 06/11 NCSA, Purdue Continuing through 06/11 47
Page 1 and 2: NSF Extensible Terascale Facility T
Page 3 and 4: Working Group Leaders Accounting Ad
Page 5 and 6: 6.5 RP Operations: Accounting/Core
Page 7 and 8: 1 Overview The TeraGrid is an open
Page 9 and 10: accounting system; an additional 94
Page 11 and 12: 2 Science and Engineering Highlight
Page 13 and 14: and that they will be able to deter
Page 15 and 16: Enhancements in photocurrent have b
Page 17 and 18: 2.2.8 Chemistry: Molecular Simulati
Page 19 and 20: to the seafloor. Vortex shedding ca
Page 21 and 22: In 2010, Aidun and colleagues made
Page 23 and 24: in treating diabetes and obesity. T
Page 25 and 26: 2.2.18 Physics: The Geophysical Hig
Page 27 and 28: service. In addition to GRAM5, we a
Page 29 and 30: Figure 4-2 Q4 usage by gateway. The
Page 31 and 32: hearing about the experiments, many
Page 33 and 34: John Cobb presented the capstone ta
Page 35 and 36: Work initiated by a helpdesk ticket
Page 37 and 38: machine) runs limit use of the syst
Page 39 and 40: PI Name Joseph Hargitai, Albert Ein
Page 41 and 42: helped Robert Coridan (UIUC) to exp
Page 43 and 44: Approach to Physics-based Seismic H
Page 45: Helly, SIO/UCSD Lattice Gauge Calcu
Page 49 and 50: During this quarter Cui prepared an
Page 51 and 52: 7. Minor performance improvements,
Page 53 and 54: OpenMP. Plan is to continue the eff
Page 55 and 56: • Joel Ledford of the California
Page 57 and 58: The team also mentioned that they h
Page 59 and 60: the makefile for compiling the sour
Page 61 and 62: Implement test cases for MPI based
Page 63 and 64: User news was posted to inform the
Page 65 and 66: authentication infrastructures. Wit
Page 67 and 68: 6.5 RP Operations: Accounting/Core
Page 69 and 70: Note that the total repository of T
Page 71 and 72: From an analysis of the hits for wh
Page 73 and 74: 7.2 Data 7.2.1 Data Movement contin
Page 75 and 76: historical time series of average p
Page 77 and 78: on a demonstration that took place
Page 79 and 80: NCSA's SGI Altix UV system, Ember,
Page 81 and 82: 8.5.2 Job Submission (GRAM) Statist
Page 83 and 84: 8.7 Security 8.7.1 Security Working
Page 85 and 86: 8.8.4 PSC During October, the PSC s
Page 87 and 88: Figure 8-8. TeraGrid Usage Summary
Page 89 and 90: Arun Yethiraj, U Wisconsin-Madison
Page 91 and 92: Institution Users NUs BRI City of H
Page 93 and 94: 4. Review Suggested Keywords - TIS
Page 95 and 96: YNT publications are intended for u
Page 97 and 98:
In response to feedback from the Sc
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Figure 2. XDMoD Portal The 9 Naviga
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Figure 5. Total number of TG jobs r
Page 103 and 104:
Figure 8. Total CPU Consumption per
Page 105 and 106:
Figure 10: XDMoD data warehouse sch
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Figure 12. AMBER-based application
Page 109 and 110:
Dr. Ann Zimmerman of the University
Page 111 and 112:
• Personal utilization informatio
Page 113 and 114:
2) Given the emergence of Green tec
Page 115 and 116:
supercomputers were a huge draw for
Page 117 and 118:
sciences by enabling and stimulatin
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The TeraGrid booth showcased group
Page 121 and 122:
10.2 EOT Impact Stories Indiana IU
Page 123 and 124:
The Ranger system at the Texas Adva
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conference to assess their level of
Page 127 and 128:
Also at SC10 Rebecca Day, a teacher
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NCAR For the first time, SIParCS ou
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communicates TeraGrid’s impact. L
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10/18/2010: TeraGrid Partner SDSC M
Page 135 and 136:
10.11 Broader Impacts LONI As part
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14 TeraGrid/Open Science Grid (OSG)
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• Task I2.1 (Run RAPTOR-OOPS work
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22. Chourasia, A. 2010. GlyphSea. I
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A.2. Publications from TeraGrid Use
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30. Tchekhovskoy, A., Narayan, R.,
Page 147 and 148:
70. P. M. Motl, J. E. Tohline & J.
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114. Krolik:Invited talk “Connect
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142. Houston, A. L. and R. B. Wilhe
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175. VAN POPPEL, B., DESJARDINS, O.
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208. J B. Clemens, E. A. Chagarov,
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238. M.H. Alkordi, A.C. Stern, J.L.
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DMR050002 272. Unusual dielectric r
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306. J. Lind, R.M. Suter, “3DXRD
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348. T.-L. Chan, J.R. Chelikowsky,
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383. A. Szyperska, J. Rak, J. Leszc
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416. Armstrong, B. D.; Soto, P.; Sh
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446. S. A. Shaikh and E. Tajkhorshi
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483. Jérôme Hénin, Grace Bran
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MCB070009 521. J. Lee, S. Ham, and
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555. Lintao Bu, G.T. Beckham, M.R.
Page 177 and 178:
Physics MCA06N025 587. “Nuclear P
Page 179 and 180:
614. Scaling studies of QCD with th
Page 181 and 182:
PHY060028 645. M. Campanelli, C. O.
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Astronomical Sciences AST060031 7.
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47. Reynolds, D. R., Hayes, J. C.,
Page 187 and 188:
February 17. 91. Liang, X.-Z., 2010
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123. J.C. Fox, A. Gupta, H.H. Bayra
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166. Bernard,P.S.,Collins,J.P.andPo
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Noncolloidal Suspensions,” 7 th I
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249. V.A. Shubert, C.W. Muller and
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Motion Simulations in the Central U
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331. L.K. Wagner and J.C. Grossman.
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377. Lawrenz, M., Wereszczynski, J.
Page 203 and 204:
423. C. Maffeo, R. Schopflin, H. Br
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463. Zhong, L., Walker, R.C., Brady
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513. McWilliams, J. C., and M. J. M
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557. Strong-Field Ionization of Lit
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613. F. Foucart, M. D. Duez, L. E.
Page 213 and 214:
Seminar What is Cyberinfrastructure
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P Tour Tech 104 IUPUI, Indianap oli
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Online Tutorial Parallel Numerical
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Type Title Location Date(s) Hours N
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the Classroom Conf. Present‟n Fro
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m; San Diego, CA Workshop (Teachers
Page 225 and 226:
Tour Ranger Tour and Cluster Manage
Page 227 and 228:
Presentation Presentation Extreme-S
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Work Package Dependencies Planned Q
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SI.MTS 2.5.10.2 P Metascheduling ca
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Page 235 and 236:
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Project-ID WBS OPMD TeraGrid AUS PY
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Project-ID WBS OPMD Description Ter
Page 241 and 242:
Work Package Dependencies Planned R
Page 243 and 244:
Work Package Dependencies Planned R
Page 245 and 246:
DV.DC.RP.TACC 3.0.1.22 O TACC RP Da
Page 247 and 248:
Bennett[30%], ongoing NOS.Sec.RP.PS
Page 249 and 250:
NOS.INCA 4.4.3.3 P knowledgbase lin
Page 251 and 252:
QSR 2010Q4 Report Values QSR 2010Q3
Page 253 and 254:
QSR 2010Q4 Report Values QSR 2010Q3
Page 255 and 256:
Among the participants were sixty g
Page 257 and 258:
the talks should address less on th
Page 259 and 260:
Appendix A - Summer School Agenda M
Page 261 and 262:
Appendix B - Attendees, Staff and P
Page 263 and 264:
Staff and Presenters Ferrer Annika
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