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rologie i - European Congress of Virology

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5 th <strong>European</strong> <strong>Congress</strong> <strong>of</strong> <strong>Virology</strong>Results: HPV was detectable from 258 cervix 39,9%, and from 92 analexamination 39,9%. 51% <strong>of</strong> cervix sample had only 1, genotype. Incontrast 15% <strong>of</strong> anal samples had only one 1, HPV genotype. 88,8% <strong>of</strong>anal samples HR, and 75,0% <strong>of</strong> anal samples had LR HPV genotype. FromHIV infected group 44% had other known sexually transmitted diseases(syphilis, gonorrhea, hepatitis B or C). Anal bleeding during sex (OR:1,66)fisting (OR1,18) passive role (OR:1,14) were independent risk factors forHR HPV after analysis. 57% <strong>of</strong> patients had more than 100 sexual partners.Conclusion: Hungarian MSM population is severely co infected with HPVand HR HPV. Smoking and high risk sexual behaviors are strong predictorfor acquiring HR HPV co infections. Early male vaccination programmight give the chance in preventing this potentially carcinogen infectionswab specimens. Epidemiologically, the typing results gave a comprehensivepicture <strong>of</strong> prevalent adenovirus genotypes during the four year periodin Finland.References1. Ylihärsilä M, Valta T, Hattara L, Karp M, Harju E, Hölsä J, Saviranta P,Waris M, Soukka T. Oligonucleotide array in well platform for detectionand genotyping human adenoviruses by utilizing upconverting phosphorlabel technology. Anal Chem 2011; 83: 1456-61.2. Ylihärsilä M, Harju E, Arppe R, Hattara L, Hölsä J, Saviranta P,Soukka T, Waris M. Genotyping <strong>of</strong> clinically relevant human adenovirusesby array in well hybridization assay. Clin Microbiol Infect 2012.doi: 10.1111/j.1469 0691.2012.03926.x.REF 506Epidemiological study <strong>of</strong> Human Adenovirus Genotypes in Finland,2009 2012Minna YLIHÄRSILÄ 1,2 , Tiina YLINEN 1 , Tero SOUKKA 2 , PetriSAVIRANTA 3 , Matti WARIS 11 Department <strong>of</strong> <strong>Virology</strong>, University <strong>of</strong> Turku, Turku, FINLAND;2 Department <strong>of</strong> Biotechnology, University <strong>of</strong> Turku, Turku, FINLAND;3 Medical Biotechnology Centre, VTT Technical Research Centre <strong>of</strong> Finland,Turku, FINLANDThere is scarce data on the epidemiology <strong>of</strong> human adenoviruses in Finland.In this study, an array in well hybridization assay [1,2] was used togenotype adenovirus types <strong>of</strong> cases detected in Finland between January2009 and December 2012. A total <strong>of</strong> 499 adenovirus positive respiratory,ocular swab, stool, and other types <strong>of</strong> specimens were included in thestudy. The specimens were first amplified with real time PCR based onthe adenovirus hexon gene, and the PCR products were typed by the arrayin well assay. The E04 (n=110, 22%), C02 (87, 17%) and C01 (46, 9%)genotypes were detected in every season. Overall, epidemic activity <strong>of</strong>type B03 (160, 32%) was observed in the autumn <strong>of</strong> 2010, after that onlysporadic cases were found. Genotypes D08, D19 and D37 (42, 8%), whichare known to cause epidemic keratoconjunctivitis, were detected in ocularREF 507ViralZone: recent updates to the virus knowledge resource.Patrick MASSON, Chantal HULO, Edouard DE CASTRO, LydieBOUGUELERET, Ioannis XENARIOS, Philippe LE MERCIERSuisse Institute <strong>of</strong> Bioinformatics, 1 rue Michel Servet, 1211 Genève 4,SuisseViralZone (viralzone.expasy.org) is a web resource that links sequencedata with virus biology knowledge, including virion structure, replicationcycle and host-virus interactions. The information is divided into viral factsheets for each viral genus, that describe virion shape, molecular biologyand epidemiology, with links to the corresponding sequences in GenBankand UniProt. Each viral genus page contains detailed illustrations, text,and PubMed references. This new update provides detailed view <strong>of</strong> viralmolecular biology through 133 viral ontology pages that describe commonsteps <strong>of</strong> viral replication cycles shared by several viral genera. Thisviral ontology is also represented in in the form <strong>of</strong> Gene ontology (GO)terms, and UniProtKB keywords. In this way, users can navigate from thedescription <strong>of</strong> a replication-cycle event to any viral genus concerned, andcan access to the sequences <strong>of</strong> genes related to this event.Vi<strong>rologie</strong>, Vol 17, supplément 2, septembre 2013S261

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