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Essentials of Computational Chemistry

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11<br />

Implicit Models for Condensed<br />

Phases<br />

11.1 Condensed-phase Effects on Structure and Reactivity<br />

The gas phase is delightful in its simplicity. At low to moderate pressures, molecules may<br />

be treated as isolated, non-interacting species, and this facilitates theoretical modeling enormously,<br />

ins<strong>of</strong>ar as the system <strong>of</strong> interest is entirely defined by the molecule itself. Were<br />

theory to restrict itself to the gas phase, however, it would be inapplicable to vast tracts <strong>of</strong><br />

chemistry, to include essentially all <strong>of</strong> biochemistry.<br />

Of course, one can carry out accurate gas-phase calculations and then make broad generalizations<br />

about how one might expect a surrounding condensed phase to affect the results.<br />

Indeed, this modus operandi was much employed well into the 1980s and still sees modest<br />

use today. Provided one can be reasonably confident that condensed-phase effects are small<br />

for the particular properties being studied (either in an absolute sense or through cancellation<br />

by judicious comparisons), such an approach can still be useful, particularly in a qualitative<br />

sense. However, significant developmental efforts over the last two decades combined<br />

with growth in the computational power required to implement them have resulted in the<br />

widespread availability <strong>of</strong> condensed-phase models designed to more accurately describe the<br />

physical nature <strong>of</strong> condensed-phase systems. This chapter considers one such class <strong>of</strong> these<br />

models, namely, implicit solvation models, which are also <strong>of</strong>ten called continuum solvation<br />

models.<br />

At first thought, <strong>of</strong> course, it might seem that the modeling <strong>of</strong> a condensed-phase system<br />

should be trivial. Take for example a liquid solution (which we will take as our ‘default’<br />

condensed phase in this and the next chapter, although others will be discussed). If our<br />

solution is dilute, then the ‘obvious’ way to construct a model is to surround our solute<br />

with a number <strong>of</strong> solvent molecules. But a critical question is, how many? If we want to<br />

consider glucose in water, for instance, it seems clear that we would want at least the entire<br />

surface <strong>of</strong> the glucose molecule to be covered. This might take, say, 14 water molecules,<br />

which we could place approximately at the corners and faces <strong>of</strong> an imaginary cube about<br />

our solute. However, it would be something <strong>of</strong> a stretch <strong>of</strong> faith to imagine this as true<br />

aqueous solvation – none <strong>of</strong> the water molecules is interacting with a second solvation<br />

<strong>Essentials</strong> <strong>of</strong> <strong>Computational</strong> <strong>Chemistry</strong>, 2nd Edition Christopher J. Cramer<br />

© 2004 John Wiley & Sons, Ltd ISBNs: 0-470-09181-9 (cased); 0-470-09182-7 (pbk)

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