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Essentials of Computational Chemistry

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11.1 CONDENSED-PHASE EFFECTS ON STRUCTURE AND REACTIVITY 391<br />

the process in solution, one need only take appropriate sums and differences <strong>of</strong> the upper<br />

horizontal leg and the vertical legs, viz.<br />

G o (sol) = Go (gas) + G o S (W) + Go S (X) +··· − G o S (A) + Go S (B) +··· (11.2)<br />

As the upper leg is a gas-phase quantity, it can be computed taking advantage <strong>of</strong> all <strong>of</strong> the<br />

technology discussed in earlier chapters. The two vertical legs, on the other hand, consist<br />

exclusively <strong>of</strong> free energies <strong>of</strong> solvation. Thus, the development <strong>of</strong> models to efficiently<br />

compute molecular solvation free energies has been a high priority.<br />

A compromise representation <strong>of</strong> our discussion thus far is to consider the effects <strong>of</strong> solvation<br />

on a one-dimensional slice through the energy surface–what we normally call the<br />

reaction coordinate–as illustrated in Figure 11.4. This representation is more informative<br />

than the free-energy cycle in showing how the structures <strong>of</strong> the stationary points differ in<br />

the gas phase and solution, in addition to their relative energies. A change in structure is<br />

indicated by a movement <strong>of</strong> the stationary point along the coordinate axis. Particularly for<br />

TS structures, which may be characterized by one or more s<strong>of</strong>t normal modes and/or a s<strong>of</strong>t<br />

reaction coordinate, changes in structure induced by solvation may be important.<br />

Note, however, that this one-dimensional representation can be somewhat misleading if<br />

it is taken to be a computational protocol. The trouble is that the one-dimensional slice <strong>of</strong><br />

E<br />

∆G S o (R)<br />

R ‡<br />

∆G S o (‡)<br />

Arbitrary coordinate<br />

P<br />

∆G S o (P)<br />

∆G o,‡<br />

gas<br />

∆G o,‡<br />

sol<br />

∆G o,rxn<br />

gas<br />

∆G o,rxn<br />

sol<br />

Figure 11.4 Gas-phase (upper) and solution (lower) reaction coordinates, and the thermodynamic<br />

cycles that connect them via free energies <strong>of</strong> solvation <strong>of</strong> the various stationary points (vertical lines).<br />

Note the significant left to right movement <strong>of</strong> all stationary points, and particularly the TS structure,<br />

on going from the gas phase to solution

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