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Cancer Immune Therapy Edited by G. Stuhler and P. Walden ...

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272 13 Applications of CpG Motifs from Bacterial DNA in <strong>Cancer</strong> Immunotherapy<br />

othioate CpG ODN despite normal activation <strong>by</strong> LPS [50]. It is therefore intriguing<br />

that TLR-9appears to be localized within the endosome [51]. Human 293 (embryonic<br />

kidney) cells do not express TLR-9, <strong>and</strong> normally are not activated <strong>by</strong> a CpG ODN.<br />

However, these cells become CpG responsive when they are transfected to express<br />

TLR-9[51]. Among human cell types, TLR-9expression is highest in B cells <strong>and</strong> plasmacytoid<br />

DC, which are also the only cell types that have been reproducibly shown<br />

to be directly activated <strong>by</strong> phosphorothioate CpG ODN [51, 52]. Perhaps the most direct<br />

evidence for the role of TLR-9in the direct recognition of a CpG motif is the fact<br />

that 293 cells transfected to express the mouse TLR-9 protein become optimally responsive<br />

to the preferred mouse CpG motif, GACGTT, while 293 cells transfected to<br />

express the human TLR-9protein become optimally responsive to the preferred human<br />

CpG motif, GTCGTT. Thus, the TLR-9protein determines the species specificity<br />

of CpG motifs <strong>and</strong> presumably either binds to the CpG motif directly or in close<br />

association with some unidentified cofactor.<br />

CpG DNA activates the MAPK pathways <strong>and</strong> NFkB within minutes of exposure in<br />

B cells, DCs <strong>and</strong> mouse macrophage-like cell lines [45, 53±55]Ç Although these signaling<br />

pathways are also used in responses to LPS, differences in their biologic effects<br />

demonstrate that there must be some additional specific signal(s) provided <strong>by</strong> LPS<br />

<strong>and</strong>/or CpG [56±59]Ç Independent signaling activities are also suggested <strong>by</strong> the observations<br />

that CpG DNA <strong>and</strong> LPS synergize for inducing macrophage NO production<br />

[60] <strong>and</strong> TNF-a expression in vitro [61], <strong>and</strong> for inducing the systemic inflammatory<br />

response syndrome (SIRS; ªcytokine stormº) in vivo [62].<br />

13.4<br />

Backbone-dependent <strong>Immune</strong> Effects of CpG Motifs <strong>and</strong> Delineation of CpG-A versus<br />

CpG-B Classes of ODN<br />

The immune effects of a CpG ODN are determined not only <strong>by</strong> the bases flanking<br />

the CpG dinucleotide, but also <strong>by</strong> the backbone of the ODN. ODN synthesized with<br />

the normal phosphodiester DNA backbone (PO) are rapidly degraded inside lymphocytes<br />

[63]. The susceptibility of phosphodiester ODN to degradation not only reduces<br />

their ability to drive B cell proliferation, but can even result in an artifact in studies<br />

using a [ 3 H]thymidine incorporation assay to measure B cell proliferation. Degradation<br />

of the phosphodiester DNA releases free thymidine which competes for the<br />

[ 3 H]thymidine, causing an apparent decrease in cell proliferation [64]. This non-specific<br />

effect is most marked if thymidine nucleotides are present at the 3¢ end of an<br />

ODN, but can also be observed with high-molecular-weight DNA such as bacterial<br />

genomic DNA. At least one exonuclease is specifically expressed in B lymphocytes,<br />

indicating that results obtained using phosphodiester DNA in one cell type cannot<br />

necessarily be extrapolated to other cell types [65]. Moreover, nuclease activities appear<br />

to be higher in human than in mouse cells, with the result that phosphodiester<br />

DNA can appear non-stimulatory unless it is added repeatedly [66, 67].<br />

Replacement of one of the non-bridging oxygen atoms around the phosphodiester<br />

linkage with a sulfur atom, which is called a phosphorothioate (PS) linkage, provides

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