Scientific Concept of the National Cohort (status ... - Nationale Kohorte
Scientific Concept of the National Cohort (status ... - Nationale Kohorte
Scientific Concept of the National Cohort (status ... - Nationale Kohorte
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Table S6.6a: Minimum detectable odds ratios (MDOR; statistical power 0.80 at significance level <strong>of</strong> ei<strong>the</strong>r 0.05 or 10-4) for a genetic main<br />
effect, by allele frequency; nested case-control study with 2 controls per case.<br />
Minimum detectable OR for genetic effect (2 controls)<br />
10 000<br />
cases<br />
5000<br />
cases<br />
4000<br />
cases<br />
3000<br />
cases<br />
500 700 1000 1500 2000 2500<br />
Minimum detectable OR for genetic effect (2 controls)<br />
cases cases cases cases cases cases<br />
400<br />
cases<br />
300<br />
cases<br />
200<br />
cases<br />
150<br />
cases<br />
Critical pvalue<br />
Allele<br />
frequency<br />
C.2 Annex: Methods for Statistical Power and Sample Size Calculations<br />
0.05 0.05 2.2 2.0 1.8 1.7 1.6 1.5 1.4 1.3 1.3 1.2 1.2 1.2 1.18 1.12<br />
0.05 10 -4 3.5 3.0 2.6 2.3 2.1 1.9 1.7 1.6 1.5 1.4 1.4 1.3 1.3 1.2<br />
0.1 0.05 1.9 1.8 1.6 1.5 1.5 1.4 1.3 1.3 1.2 1.19 1.17 1.15 1.13 1.10<br />
0.1 10 -4 2.9 2.5 2.2 2.0 1.8 1.7 1.6 1.4 1.4 1.3 1.3 1.3 1.2 1.16<br />
0.25 0.05 1.8 1.6 1.5 1.4 1.4 1.3 1.3 1.2 1.17 1.15 1.14 1.12 1.11 1.08<br />
0.25 10 -4 2.6 2.3 2.0 1.8 1.7 1.6 1.5 1.4 1.3 1.3 1.2 1.2 1.18 1.13<br />
0.5 0.05 2.1 1.9 1.6 1.5 1.5 1.4 1.3 1.2 1.2 1.18 1.16 1.14 1.13 1.09<br />
0.5 10 -4 150 200 300 400 500 700 1000 1500 2000 2500 3000 4000 5000 10 000<br />
cases cases cases cases cases cases cases cases cases cases cases cases cases cases<br />
0.05 0.05 2.2 2.0 1.8 1.7 1.6 1.5 1.4 1.3 1.3 1.2 1.2 1.2 1.18 1.12<br />
0.05 10<br />
3.9 3.2 2.5 2.1 2.0 1.7 1.6 1.5 1.4 1.3 1.3 1.3 1.2 1.15<br />
* highlighted are <strong>the</strong> combinations where MDOR is 1.5 or smaller<br />
Minimum detectable OR for genetic effect (4 controls)<br />
150 200 300 400 500 700 1000 1500 2000 2500 3000 4000 5000 10 000<br />
cases cases cases cases cases cases cases cases cases cases cases cases cases cases<br />
-4 3.5 3.0 2.6 2.3 2.1 1.9 1.7 1.6 1.5 1.4 1.4 1.3 1.3 1.2<br />
0.1 0.05 1.9 1.8 1.6 1.5 1.5 1.4 1.3 1.3 1.2 1.19 1.17 1.15 1.13 1.10<br />
0.1 10 -4 2.9 2.5 2.2 2.0 1.8 1.7 1.6 1.4 1.4 1.3 1.3 1.3 1.2 1.16<br />
0.25 0.05 1.8 1.6 1.5 1.4 1.4 1.3 1.3 1.2 1.17 1.15 1.14 1.12 1.11 1.08<br />
0.25 10 -4 2.6 2.3 2.0 1.8 1.7 1.6 1.5 1.4 1.3 1.3 1.2 1.2 1.18 1.13<br />
0.5 0.05 2.1 1.9 1.6 1.5 1.5 1.4 1.3 1.2 1.2 1.18 1.16 1.14 1.13 1.09<br />
0.5 10 -4 Table S6.6b: Minimum 3.9 detectable 3.2 odds 2.5 ratios 2.1 (MDOR; 2.0 statistical 1.7 power 0.80, 1.6 at significance 1.5 1.4 level <strong>of</strong> ei<strong>the</strong>r 1.3 0.05 1.3 or 10-4) 1.3 for a genetic 1.2 main 1.15 effect,<br />
* by highlighted allele frequency; are <strong>the</strong> combinations nested case-control where MDOR study is 1.5 with or 4 smaller controls per case<br />
Minimum detectable OR for genetic effect (4 controls)<br />
Critical pvalue<br />
Allele<br />
frequency<br />
279<br />
Critical pvalue<br />
Allele<br />
frequency<br />
0.05 0.05 2.0 1.9 1.7 1.6 1.5 1.5 1.4 1.3 1.3 1.2 1.2 1.18 1.16 1.11<br />
0.05 10 -4 3.2 2.8 2.4 2.1 2.0 1.8 1.7 1.5 1.5 1.4 1.4 1.3 1.3 1.2<br />
0.1 0.05 1.8 1.7 1.5 1.5 1.4 1.3 1.3 1.2 1.19 1.17 1.16 1.14 1.12 1.09<br />
0.1 10 -4 2.6 2.3 2.0 1.9 1.7 1.6 1.5 1.4 1.3 1.3 1.3 1.2 1.2 1.15<br />
0.25 0.05 1.7 1.6 1.4 1.4 1.3 1.3 1.2 1.19 1.16 1.14 1.13 1.11 1.10 1.07<br />
0.25 10 -4 2.4 2.1 1.9 1.7 1.6 1.5 1.4 1.3 1.3 1.2 1.2 1.19 1.17 1.12<br />
0.5 0.05 1.9 1.8 1.6 1.5 1.4 1.3 1.3 1.2 1.19 1.16 1.15 1.13 1.11 1.08<br />
0.5 10 -4 150 200 300 400 500 700 1000 1500 2000 2500 3000 4000 5000 10 000<br />
cases cases cases cases cases cases cases cases cases cases cases cases cases cases<br />
0.05 0.05 2.0 1.9 1.7 1.6 1.5 1.5 1.4 1.3 1.3 1.2 1.2 1.18 1.16 1.11<br />
0.05 10<br />
3.5 2.8 2.3 2.0 1.8 1.7 1.5 1.4 1.3 1.3 1.3 1.2 1.2 1.14<br />
* highlighted are <strong>the</strong> combinations where MDOR is 1.5 or smaller<br />
-4 3.2 2.8 2.4 2.1 2.0 1.8 1.7 1.5 1.5 1.4 1.4 1.3 1.3 1.2<br />
0.1 0.05 1.8 1.7 1.5 1.5 1.4 1.3 1.3 1.2 1.19 1.17 1.16 1.14 1.12 1.09<br />
0.1 10 -4 2.6 2.3 2.0 1.9 1.7 1.6 1.5 1.4 1.3 1.3 1.3 1.2 1.2 1.15<br />
0.25 0.05 1.7 1.6 1.4 1.4 1.3 1.3 1.2 1.19 1.16 1.14 1.13 1.11 1.10 1.07<br />
0.25 10 -4 2.4 2.1 1.9 1.7 1.6 1.5 1.4 1.3 1.3 1.2 1.2 1.19 1.17 1.12<br />
0.5 0.05 1.9 1.8 1.6 1.5 1.4 1.3 1.3 1.2 1.19 1.16 1.15 1.13 1.11 1.08<br />
0.5 10 -4 3.5 2.8 2.3 2.0 1.8 1.7 1.5 1.4 1.3 1.3 1.3 1.2 1.2 1.14<br />
Critical pvalue<br />
Allele<br />
frequency<br />
* highlighted are <strong>the</strong> combinations where MDOR is 1.5 or smaller<br />
C.2