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A Semi-Implicit, Three-Dimensional Model for Estuarine ... - USGS

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170 A <strong>Semi</strong>-<strong>Implicit</strong>, <strong>Three</strong>-<strong>Dimensional</strong> <strong>Model</strong> <strong>for</strong> <strong>Estuarine</strong> Circulation<br />

Momentum equations,<br />

Salt transport equation,<br />

∂Hû<br />

∂Hûû<br />

∂Hûvˆ<br />

--------- ------------- ------------ H<br />

∂tˆ<br />

∂xˆ<br />

∂yˆ<br />

ûω ∂<br />

+ + + --------- – fHvˆ gH<br />

∂σ<br />

ζ ∂<br />

= – -----<br />

∂xˆ<br />

gH<br />

------ H<br />

ρ<br />

0<br />

∂<br />

---- ρ<br />

∂xˆ<br />

ˆ 0<br />

∫<br />

∂H<br />

dσ′ ------ σ<br />

∂xˆ<br />

σ<br />

ρˆ<br />

0<br />

∫<br />

∂<br />

–<br />

+ ----- dσ′<br />

∂σ<br />

σ<br />

∂<br />

---- ⎛ ∂û<br />

HA ----- ⎞ ∂<br />

---- ⎛ ∂û<br />

∂xˆ<br />

⎝ H∂xˆ<br />

⎠<br />

HA ----- ⎞ ∂<br />

∂yˆ<br />

⎝ H∂yˆ<br />

⎠<br />

H.O.T. -----<br />

∂σ<br />

A V<br />

------<br />

H<br />

û ∂<br />

+ + + + ⎛ ----- ⎞<br />

⎝ ∂σ⎠<br />

and<br />

∂<br />

---------<br />

Hvˆ<br />

------------<br />

∂Hûvˆ<br />

------------<br />

∂Hvˆvˆ<br />

H<br />

∂tˆ<br />

∂xˆ<br />

∂yˆ<br />

vˆω ∂<br />

+ + + --------- + fHû gH<br />

∂σ<br />

ζ ∂<br />

= – -----<br />

∂yˆ<br />

–<br />

gH<br />

------ H<br />

ρ0 ∂<br />

---- ρ<br />

∂yˆ<br />

ˆ 0<br />

∫ dσ′<br />

σ<br />

∂Hsˆ<br />

∂Hûsˆ<br />

∂Hvˆsˆ<br />

--------- ------------ ------------ H<br />

∂tˆ<br />

∂xˆ<br />

∂yˆ<br />

ωsˆ ∂<br />

+ + + -------- =<br />

∂σ<br />

∂H<br />

------ σ<br />

∂yˆ<br />

ρˆ<br />

0<br />

∫<br />

∂<br />

+ ----- dσ′<br />

∂σ<br />

σ<br />

----<br />

∂ ⎛ ∂<br />

HA ---vˆ<br />

⎞ ----<br />

∂ ⎛ ∂<br />

∂xˆ<br />

⎝ H HA ---vˆ<br />

⎞<br />

∂xˆ<br />

⎠ ∂yˆ<br />

⎝ H H.O.T. -----<br />

∂<br />

∂yˆ<br />

⎠<br />

∂σ<br />

AV ------<br />

H<br />

vˆ ∂<br />

+ + + + ⎛ ----- ⎞ ;<br />

⎝ ∂σ⎠<br />

(C.14)<br />

(C.15)<br />

∂<br />

---- ⎛HD ----<br />

∂sˆ<br />

⎞ ----<br />

∂ ∂sˆ<br />

∂xˆ<br />

⎝ H + ⎛HD ---- ⎞<br />

∂xˆ<br />

⎠ ∂yˆ<br />

⎝ H + H.O.T. -----<br />

∂<br />

∂yˆ<br />

⎠<br />

∂σ<br />

DV ------<br />

H<br />

sˆ ∂<br />

+ ⎛ ----- ⎞ .<br />

(C.16)<br />

⎝ ∂σ⎠<br />

The higher order terms (H.O.T.) in equations C.14, C.15, and C.16 are those due to all but the first term on the right sides of<br />

operators C.10 and C.11. The H.O.T. contain horizontal gradients of the water depth and water surface slope and often are neglected<br />

in practice (Mellor and Blumberg, 1985). Neglecting these terms is convenient because their inclusion can add considerably to the<br />

cost of running a model and can lead to a less stable and accurate numerical <strong>for</strong>mulation. In regions of steep bottom slopes,<br />

however, the omission of the H.O.T. in solving the salt transport equation can cause spurious vertical diffusion of salt, especially<br />

in cases where significant salt stratification is present. In these cases the complete trans<strong>for</strong>mation must be included or a special<br />

numerical solution strategy, such as the finite-volume method applied to a σ grid by Stelling and van Kester (1994), should be used.

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