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Protein Expression and Purification Series - Bio-Rad

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<strong>Protein</strong> <strong>Expression</strong> <strong>and</strong> <strong>Purification</strong> <strong>Series</strong><br />

DHFR Enzymatic Activity Assay<br />

Determining which fraction to test for enzyme activity.<br />

Review your SDS-PAGE gel from your purification to determine which fraction(s)<br />

to test. Note that centrifugation purification will have one desalted fraction while<br />

instrumentation-based purification will have three fractions.<br />

Set up spectrophotometer for kinetics measurements at<br />

340 nm.<br />

Blanking the instrument. Add 985 µl 1x PBS to cuvette;<br />

place in instrument, read as blank. Save cuvette with PBS.<br />

Running the no substrate control reaction.<br />

Add 6 µl of 10 mM NADPH to cuvette containing 985 µl 1x PBS.<br />

Add 15 µl of purified, GST-DHFR-His eluate to cuvette. Cover<br />

cuvette with parafilm <strong>and</strong> invert 10 times to mix<br />

Place cuvette in spectrophotometer <strong>and</strong> begin kinetics run.<br />

As run is proceeding, record absorbance value every<br />

15 seconds for 150 seconds. Remove <strong>and</strong> save cuvette from<br />

the spectrophotometer.<br />

Running the enzymatic reaction with the GST-DHFR-His,<br />

NADPH (cofactor) <strong>and</strong> DHF (substrate).<br />

Note: The enzyme reaction should be prepared while st<strong>and</strong>ing<br />

at the spectrophotometer. The reaction occurs extremely<br />

quickly <strong>and</strong> it is necessary to place the cuvette in the<br />

spectrophotometer <strong>and</strong> start the readings as quickly as<br />

possible once the DHF has been added.<br />

Add 5 µl of 10 mM DHF to the cuvette already containing<br />

1x PBS, your GST-DHFR-His sample <strong>and</strong> NADPH. Quickly<br />

cover the cuvette with parafilm <strong>and</strong> invert five times.<br />

Place the cuvette in the spectrophotometer <strong>and</strong> begin kinetics<br />

run. As run is proceeding, record absorbance value every<br />

15 seconds for 150 seconds. Remove cuvette from the<br />

spectrophotometer.<br />

Calculate the activity following the instructions in the manual.<br />

Chapter 9: DHFR Enzymatic Activity Assay Student Protocol<br />

209<br />

+ 985 µl<br />

1x PBS<br />

+ 15 µl<br />

GST-DHFR-His<br />

eluate<br />

1x PBS<br />

1x PBS<br />

NADPH<br />

GST-DHFR-His eluate<br />

1x PBS<br />

NADPH<br />

GST-DHFR-His eluate<br />

+ 6 µl 10<br />

mM<br />

NADPH<br />

+ 5 µl<br />

10 mM DHF<br />

CHAPTER 9<br />

DHFR ENZYMATIC<br />

ASSAY

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