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Principles of Fluorescence Spectroscopy

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162 FREQUENCY-DOMAIN LIFETIME MEASUREMENTS<br />

lated values, as indicated by a minimum value for the goodness-<strong>of</strong>-fit<br />

parameters χ R 2:<br />

χ 2 R 1<br />

ν ∑ ω<br />

[ φω φcω ] δφ<br />

2<br />

1<br />

ν ∑ ω<br />

[ mω mcω ] δm<br />

2<br />

(5.11)<br />

where ν is the number <strong>of</strong> degrees <strong>of</strong> freedom. The value <strong>of</strong><br />

ν is given by the number <strong>of</strong> measurements, which is typically<br />

twice the number <strong>of</strong> frequencies minus the number <strong>of</strong><br />

variable parameters. The subscript c is used to indicate calculated<br />

values for assumed values <strong>of</strong> α i and τ i , and δφ and<br />

δm are the uncertainties in the phase and modulation values,<br />

respectively. Unlike the errors in the photon-counting<br />

experiments (Chapter 4), these errors cannot be estimated<br />

directly from Poisson statistics.<br />

The correctness <strong>of</strong> a model is judged based on the values<br />

<strong>of</strong> χ R 2. For an appropriate model and random noise, χ R 2<br />

is expected to be near unity. If χ R 2 is sufficiently greater<br />

than unity, then it may be correct to reject the model. Rejection<br />

is judged from the probability that random noise could<br />

be the origin <strong>of</strong> the value <strong>of</strong> χ R 2. 10,11 For instance, a typical<br />

frequency-domain measurement from this laboratory contains<br />

phase and modulation data at 25 frequencies. A double-exponential<br />

model contains three floating parameters<br />

(two τ i and one α i ), resulting in 47 degrees <strong>of</strong> freedom. A<br />

value <strong>of</strong> χ R 2 equal to 2 is adequate to reject the model with<br />

a certainty <strong>of</strong> 99.9% or higher (Table 4.2).<br />

In practice, the values <strong>of</strong> χ R 2 change depending upon<br />

the values <strong>of</strong> the uncertainties (δφ and δm) used in its calculation.<br />

The effects <strong>of</strong> selecting different values <strong>of</strong> δφ and<br />

δm has been considered in detail. 12–13 The fortunate result is<br />

that the recovered parameter values (α i and τ i ) do not<br />

depend strongly on the chosen values <strong>of</strong> δφ and δm. The<br />

parameter values can be expected to be sensitive to δφ and<br />

δm if the data are just adequate to determine the parameter<br />

values, that is, at the limits <strong>of</strong> resolution.<br />

For consistency and ease <strong>of</strong> day-to-day data interpretation<br />

we use constant values <strong>of</strong> δφ = 0.2E and δm = 0.005.<br />

While the precise values may vary between experiments,<br />

the χ R 2 values calculated in this way indicate to us the<br />

degree <strong>of</strong> error in a particular data set. For instance, if a particular<br />

data set has poor signal-to-noise, or systematic<br />

errors, the value <strong>of</strong> χ R 2 is elevated even for the best fit. The<br />

use <strong>of</strong> fixed values <strong>of</strong> δφ and δm does not introduce any<br />

ambiguity in the analysis, as it is the relative values <strong>of</strong> χ R 2<br />

that are used in accepting or rejecting a model. We typically<br />

compare χ R 2 for the one-, two-, and three-exponential<br />

fits. If χ R 2 decreases tw<strong>of</strong>old or more as the model is incre-<br />

mented, then the data probably justify inclusion <strong>of</strong> the additional<br />

decay time. According to Table 4.3, a ratio <strong>of</strong> χ R 2 values<br />

<strong>of</strong> 2 is adequate to reject the simpler model with a 99%<br />

certainty. It should be remembered that the values <strong>of</strong> δφ and<br />

δm might depend upon frequency, either as a gradual<br />

increase in random error with frequency, or as higher-thanaverage<br />

uncertainties at discrete frequencies due to interference<br />

or other instrumental effects. In most cases the recovered<br />

parameter values are independent <strong>of</strong> the chosen values<br />

<strong>of</strong> δφ and δm. However, caution is needed as one approaches<br />

the resolution limits <strong>of</strong> the measurements. In these cases<br />

the values <strong>of</strong> the recovered parameters might depend upon<br />

the values chosen for δφ and δm.<br />

The values <strong>of</strong> δφ and δm can be adjusted as appropriate<br />

for a particular instrument. For instance, the phase data<br />

may become noisier with increasing modulation frequency<br />

because the phase angle is being measured from a smaller<br />

signal. One can use values <strong>of</strong> δφ and δm which increase<br />

with frequency to account for this effect. In adjusting the<br />

values <strong>of</strong> δφ and δm, we try to give equal weight to the<br />

phase and modulation data. This is accomplished by adjusting<br />

the relative values <strong>of</strong> δφ and δm so that the sum <strong>of</strong> the<br />

squared deviations (eq. 5.11) is approximately equal for the<br />

phase and modulation data.<br />

Another way to estimate the values <strong>of</strong> δφ and δm is<br />

from the data itself. The phase and modulation values at<br />

each frequency are typically an average <strong>of</strong> 10 to 100 individual<br />

measurements. In principle, the values <strong>of</strong> δφ and δm<br />

are given by the standard deviation <strong>of</strong> the mean <strong>of</strong> the phase<br />

and modulation, respectively. In practice we find that the<br />

standard deviation <strong>of</strong> the mean underestimates the values <strong>of</strong><br />

δφ and δm. This probably occurs because the individual<br />

phase and modulation measurements are not independent <strong>of</strong><br />

each other. For simplicity and consistency, the use <strong>of</strong> constant<br />

values <strong>of</strong> δφ and δm is recommended.<br />

In analyzing frequency-domain data it is advisable to<br />

avoid use <strong>of</strong> the apparent (τ φ ) or modulation (τ m ) lifetimes.<br />

These values are the lifetimes calculated from the measured<br />

phase and modulation values at a given frequency. These<br />

values can be misleading, and are best avoided. The characteristics<br />

<strong>of</strong> τ φ and τ m are discussed in Section 5.10.<br />

5.1.2. Global Analysis <strong>of</strong> Frequency-Domain Data<br />

Resolution <strong>of</strong> closely spaced parameters can be improved<br />

by global analysis. This applies to the frequency-domain<br />

data as well as the time-domain data. The use <strong>of</strong> global<br />

analysis is easiest to visualize for a mixture <strong>of</strong> fluorophores

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