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Principles of Fluorescence Spectroscopy

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PRINCIPLES OF FLUORESCENCE SPECTROSCOPY 309<br />

Figure 8.53. Three-dimensional structure <strong>of</strong> yellow fluorescent protein<br />

YFP-H48Q. The solid line is the peptide backbone, and the green<br />

structure is the native chromophore. The red and blue surfaces show<br />

the location <strong>of</strong> bound iodide ions. Reprinted with permission from<br />

[132].<br />

As discussed in Chapter 19, a wide variety <strong>of</strong> fluorophores<br />

are available that can be used for intracellular<br />

sensing. It is difficult to use these probes in an intracellular<br />

environment because they are likely to bind to macromolecules<br />

that can shift the analyte calibration curves. GFP and<br />

its variants are promising intracellular sensors because the<br />

chromophore is buried in the β-barrel and unable to interact<br />

directly with biomolecules. With this consideration in mind,<br />

YFP-H148Q was used to measure the intracellular pH <strong>of</strong><br />

Swiss 3T3 fibroblasts. 133 An advantage <strong>of</strong> GFP is that the<br />

probe is synthesized by the cell itself, and not added to the<br />

cells. The fibroblast were transfected with the gene for<br />

YFP-H148Q, which appeared as a bright green fluorescence<br />

in the epifluorescence microscope (Figure 8.55). The<br />

response <strong>of</strong> the protein to pH and chloride was tested using<br />

ionophores to modify the internal ion concentrations. 133<br />

When excited at 480 nm the emission intensity decreased<br />

with increasing pH and decreased with increasing chloride<br />

Figure 8.54. Absorption spectra <strong>of</strong> YFP-H148Q in the presence <strong>of</strong><br />

NaCl, pH 6.4. Binding <strong>of</strong> chloride is thought to stabilize the right side<br />

structure in the upper panel. Revised from [133].<br />

concentrations. These remarkable results show that it is<br />

now possible to insert genes that cause the cells to synthesize<br />

their own fluorophores, and the genetically engineered<br />

protein-fluorophore can be designed to have sensitivity to a<br />

desired analyte.<br />

8.14.4. Amplified Quenching<br />

Collisional quenching was useful for sensing and imaging<br />

<strong>of</strong> chloride because <strong>of</strong> its high physiological concentration.<br />

However, quenching does not usually provide high sensitivity<br />

detection. 134 However, it is now possible to amplify<br />

quenching to obtain higher sensitivity detection. 135 Amplification<br />

is accomplished in two ways. The fluorophore is<br />

bound to a fluorescent conjugated polymer (Figure 8.56). In<br />

this case the polymer contained conjugated stilbene<br />

residues. This polymer was found to be highly sensitive to<br />

quenching by the PET acceptor methylviologen (MV 2+ ).<br />

The Stern-Volmer quenching constant is near 10 7 M –1 ,<br />

which is clearly too large for collisional quenching.<br />

There are two reasons for the large quenching constant.<br />

The positively charged MV 2+ binds electrostatically to the<br />

polymer. Secondly, the excited state migrates rapidly<br />

between the stilbene residues. If any one residue is excited<br />

this energy migrates until it encounters the bound MV 2+ .<br />

One MV 2+ quenches the emission from about 1000 stil-

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