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Principles of Fluorescence Spectroscopy

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774 SINGLE-MOLECULE DETECTION<br />

Figure 23.29. Emission spectra and intensity decay for a mixture <strong>of</strong><br />

donor-alone (D) and donor–acceptor (D-A) pairs, and acceptor alone,<br />

as seen in an ensemble-averaged measurement.<br />

Observations on single molecules can resolve such heterogeneity<br />

and bypass ensemble averaging. Suppose the<br />

donor-labeled protein is immobilized on a glass surface<br />

(Figure 23.30) and that single protein molecules could be<br />

separately observed. Then the signal due to any single molecule<br />

would be due to either a donor-alone molecule (left)<br />

or a protein molecule that contains bound acceptor (right).<br />

Figure 23.30. Emission spectra and intensity decays for single-molecule<br />

measurements for a mixture <strong>of</strong> donor-alone and donor–acceptor<br />

pairs immobilized on a surface.<br />

Figure 23.31. Schematic <strong>of</strong> enzyme-catalyzed hydrolysis <strong>of</strong> a substrate–phosphate<br />

(S–Pi) as seen by SMD.<br />

Figure 23.32. Single-molecule RET <strong>of</strong> a ribozyme molecule. The<br />

lower panels show the time-dependent donor (green) and acceptor<br />

(red) intensity and RET efficiency. Reprinted with permission from<br />

[56], [58].

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