Physical Principles of Electron Microscopy: An Introduction to TEM ...
Physical Principles of Electron Microscopy: An Introduction to TEM ...
Physical Principles of Electron Microscopy: An Introduction to TEM ...
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102 Chapter 4<br />
whose composition or thickness varies between different regions. Thicker<br />
regions <strong>of</strong> the sample scatter a higher fraction <strong>of</strong> the incident electrons, many<br />
<strong>of</strong> which are absorbed by the objective diaphragm, so that the corresponding<br />
regions in the image appear dark, giving rise <strong>to</strong> thickness contrast in the<br />
image. Regions <strong>of</strong> higher a<strong>to</strong>mic number also appear dark relative <strong>to</strong> their<br />
surroundings, due mainly <strong>to</strong> an increase in the amount <strong>of</strong> elastic scattering,<br />
as shown by Eq. (4.15), giving a<strong>to</strong>mic-number contrast (Z-contrast). Taken<br />
<strong>to</strong>gether, these two effects are <strong>of</strong>ten described as mass-thickness contrast.<br />
They provide the information content <strong>of</strong> <strong>TEM</strong> images <strong>of</strong> amorphous<br />
materials, in which the a<strong>to</strong>ms are arranged more-or-less randomly (not in a<br />
regular array, as in a crystal), as illustrated by the following examples.<br />
Stained biological tissue<br />
<strong>TEM</strong> specimens <strong>of</strong> biological (animal or plant) tissue are made by cutting<br />
very thin slices (sections) from a small block <strong>of</strong> embedded tissue (held<br />
<strong>to</strong>gether by epoxy glue) using an instrument called an ultramicro<strong>to</strong>me that<br />
employs a glass or diamond knife as the cutting blade. To prevent the<br />
sections from curling up, they are floated on<strong>to</strong> a water surface, which<br />
supports them evenly by surface tension. A fine-mesh copper grid (3-mm<br />
diameter, held at its edge by tweezers) is then introduced below the water<br />
surface and slowly raised, leaving the tissue section supported by the grid.<br />
After drying in air, the tissue remains attached <strong>to</strong> the grid by local<br />
mechanical<br />
and chemical forces.<br />
Tissue sections prepared in this way are fairly uniform in thickness,<br />
therefore almost no contrast arises from the thickness term in Eq. (4.15).<br />
Their a<strong>to</strong>mic number also remains approximately constant (Z � 6 for dry<br />
tissue), so the overall contrast is very low and the specimen appears<br />
featureless in the <strong>TEM</strong>. To produce scattering contrast, the sample is<br />
chemically treated by a process called staining. Before or after slicing, the<br />
tissue is immersed in a solution that contains a heavy (high-Z) metal. The<br />
solution is absorbed non-uniformly by the tissue; a positive stain, such as<br />
lead citrate or uranyl acetate, tends <strong>to</strong> migrate <strong>to</strong> structural features<br />
( organelles) within each cell.<br />
As illustrated in Fig. 4-6, these regions appear dark in the <strong>TEM</strong> image<br />
because Pb or U a<strong>to</strong>ms strongly scatter the incident electrons, and most <strong>of</strong><br />
the scattered electrons are absorbed by the objective diaphragm. A negative<br />
stain (such as phosphotungstic acid) tends <strong>to</strong> avoid cellular structures, which<br />
in the <strong>TEM</strong> image appear bright relative <strong>to</strong> their surroundings, as they<br />
contain fewer tungsten a<strong>to</strong>ms.