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72 1 Amino Acids, Peptides, Proteins

Table 1.29. Ornithine is formed during cleavage

of arginine (Reaction 1.54).

(1.154)

Formation of D-amino acids occurs through

abstraction of a proton via a C2-carbanion.

The reaction with L-isoleucine is particularly

interesting. L-Isoleucine is isomerized to

D-alloisoleucine which, unlike other D-amino

acids, is a diastereoisomer and so has a retention

time different from L-isoleucine, making its

determination possible directly from an amino

acid chromatogram:

Table 1.29. Formation of unusual amino acids by alkali

treatment of protein

Name

Formula

3-N 6 -Lysinoalanine COOH COOH

(R = H) | |

3-N 6 -Lysino-3-methyl- CHNH 2 CHNH 2

alanine(R = CH 3 ) | |

CHR—NH—(CH 2 ) 4

3-N 5 -Ornithinoalanine COOH COOH

(R = H) | |

3-N 5 -Ornithino-3- CHNH 2 CHNH 2

methylalanine (R = CH 3 ) | |

CHR—NH—(CH 2 ) 3

Lanthionine (R = H) COOH COOH

3-Methyllanthionine | |

(R = CH 3 ) CHNH 2 CHNH 2

| |

CHR——S——CH 2

3-Aminoalanine (R =H) COOH

2,3-Diamino |

butyric acid (R = CH 3 ) CHNH 2

|

CHRNH 2

(1.155)

Heating proteins in a dry state at neutral pH

results in the formation of isopeptide bonds

between the ε-amino groups of lysine residues

and the β-orγ-carboxamide groups of asparagine

and glutamine residues:

These isopeptide bonds are cleaved during acidic

hydrolysis of protein and, therefore, do not

contribute to the occurrence of unusual amino

acids. A more intensive heat treatment of proteins

in the presence of water leads to a more extensive

degradation.

Oxidative changes in proteins primarily involve

methionine, which relatively readily forms methionine

sulfoxide:

(1.157)

(1.156)

The formation of methionine sulfoxide was observed

in connection with lipid peroxidation, phenol

oxidation and light exposure in the presence

of oxygen and sensitizers such as riboflavin.

After in vivo reduction to methionine, proteinbound

methionine sulfoxide is apparently biologically

available.

Figure 1.37 shows the effect of alkaline treatment

of a protein isolate of sunflower seeds. Serine,

threonine, arginine and isoleucine concentrations

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